Nicolas Servant
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/HiTC |
| git_branch: RELEASE_3_14 |
| git_last_commit: 2b50c43 |
| git_last_commit_date: 2021-10-26 12:02:53 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:42 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the HiTC package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HiTC.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 879/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| HiTC 1.38.0 (landing page) Nicolas Servant
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: HiTC |
| Version: 1.38.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/HiTC_1.38.0.tar.gz && rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiTC.buildbin-libdir HiTC_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL HiTC_1.38.0.zip && rm HiTC_1.38.0.tar.gz HiTC_1.38.0.zip |
| StartedAt: 2022-04-12 06:35:28 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:38:02 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 153.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/HiTC_1.38.0.tar.gz && rm -rf HiTC.buildbin-libdir && mkdir HiTC.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=HiTC.buildbin-libdir HiTC_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL HiTC_1.38.0.zip && rm HiTC_1.38.0.tar.gz HiTC_1.38.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
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0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
5 725k 5 42989 0 0 272k 0 0:00:02 --:--:-- 0:00:02 272k
100 725k 100 725k 0 0 590k 0 0:00:01 0:00:01 --:--:-- 590k
100 725k 100 725k 0 0 590k 0 0:00:01 0:00:01 --:--:-- 589k
install for i386
* installing *source* package 'HiTC' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'HiTC'
finding HTML links ... done
CQC html
HTCexp-class html
HTClist-class html
HiTC-internal html
Nora_5C html
binningC html
directionalityIndex html
discretize html
export.my5C html
exportC html
extractRegion html
getAnnotatedRestrictionSites html
getExpectedCounts html
getPearsonMap html
getRestrictionFragmentsPerChromosome html
import.my5C html
importC html
intervalsDist html
mapC html
normICE html
normLGF html
pca.hic html
removeIntervals html
setGenomicFeatures html
setIntervalScale html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'HiTC' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'HiTC' as HiTC_1.38.0.zip
* DONE (HiTC)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'HiTC' successfully unpacked and MD5 sums checked