| Back to Multiple platform build/check report for BioC 3.14 |
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This page was generated on 2022-04-13 12:06:19 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the ChIPanalyser package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ChIPanalyser.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 298/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ChIPanalyser 1.16.0 (landing page) Patrick C.N. Martin
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: ChIPanalyser |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ChIPanalyser_1.16.0.tar.gz && rm -rf ChIPanalyser.buildbin-libdir && mkdir ChIPanalyser.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPanalyser.buildbin-libdir ChIPanalyser_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ChIPanalyser_1.16.0.zip && rm ChIPanalyser_1.16.0.tar.gz ChIPanalyser_1.16.0.zip |
| StartedAt: 2022-04-12 06:11:03 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 06:12:57 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 114.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/ChIPanalyser_1.16.0.tar.gz && rm -rf ChIPanalyser.buildbin-libdir && mkdir ChIPanalyser.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ChIPanalyser.buildbin-libdir ChIPanalyser_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL ChIPanalyser_1.16.0.zip && rm ChIPanalyser_1.16.0.tar.gz ChIPanalyser_1.16.0.zip
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install for i386
* installing *source* package 'ChIPanalyser' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'drop' in package 'ChIPanalyser'
** help
*** installing help indices
converting help for package 'ChIPanalyser'
finding HTML links ... done
BPFrequency-methods html
BPFrequency html
BPFrequency_--methods html
BPFrequency_- html
ChIPScore-class html
ChIPanalyser-package html
DNASequenceLength-methods html
DNASequenceLength html
GRList-class html
PFMFormat-methods html
PFMFormat html
PFMFormat_--methods html
PFMFormat_ html
PWMThreshold-methods html
PWMThreshold html
PWMThreshold_--methods html
PWMThreshold_- html
PWMpseudocount-methods html
PWMpseudocount html
PWMpseudocount_--methods html
PWMpseudocount_- html
PositionFrequencyMatrix-methods html
PositionFrequencyMatrix html
PositionFrequencyMatrix_--methods html
PositionFrequencyMatrix_- html
PositionWeightMatrix-methods html
PositionWeightMatrix html
PositionWeightMatrix_--methods html
PositionWeightMatrix_- html
averageExpPWMScore-methods html
averageExpPWMScore html
backgroundSignal-methods html
backgroundSignal html
backgroundSignal_--methods html
backgroundSignal_- html
boundMolecules-methods html
boundMolecules html
boundMolecules_--methods html
boundMolecules_- html
chipMean-methods html
chipMean html
chipMean_--methods html
chipMean_- html
chipSd-methods html
chipSd html
chipSd_--methods html
chipSd_- html
chipSmooth-methods html
chipSmooth html
chipSmooth_--methods html
chipSmooth_- html
computeChIPProfile html
finding level-2 HTML links ... done
computeGenomeWideScores html
computeOccupancy html
computeOptimal html
computePWMScore html
data html
drop-methods html
drop html
genomicProfiles-class html
genomicProfiles html
genomicProfilesInternal-class html
initialize-methods html
lambdaPWM-methods html
lambdaPWM html
lambdaPWM_--methods html
lambdaPWM_ html
loci-class html
loci-methods html
loci html
lociWidth-methods html
lociWidth html
lociWidth_--methods html
lociWidth_ html
maxPWMScore-methods html
maxPWMScore html
maxSignal-methods html
maxSignal html
maxSignal_--methods html
maxSignal_- html
minPWMScore-methods html
minPWMScore html
naturalLog-methods html
naturalLog html
naturalLog_--methods html
naturalLog_- html
noOfSites-methods html
noOfSites html
noOfSites_--methods html
noOfSites_- html
noiseFilter-methods html
noiseFilter html
noiseFilter_--methods html
noiseFilter_ html
nos-class html
parameterOptions-class html
parameterOptions html
ploidy-methods html
ploidy html
ploidy_--methods html
ploidy_- html
plotOccupancyProfile html
plotOptimalHeatMaps html
processingChIP html
profileAccuracyEstimate html
profiles-methods html
removeBackground-methods html
removeBackground html
removeBackground_--methods html
removeBackground_- html
scores-methods html
scores html
searchSites html
show-methods html
stepSize-methods html
stepSize html
stepSize_--methods html
stepSize_- html
strandRule-methods html
strandRule html
strandRule_--methods html
strandRule_- html
whichstrand-methods html
whichstrand html
whichstrand_--methods html
whichstrand_- html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ChIPanalyser' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ChIPanalyser' as ChIPanalyser_1.16.0.zip
* DONE (ChIPanalyser)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'ChIPanalyser' successfully unpacked and MD5 sums checked