Mark van de Wiel
| Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022) |
| git_url: https://git.bioconductor.org/packages/CGHbase |
| git_branch: RELEASE_3_14 |
| git_last_commit: 88afa50 |
| git_last_commit_date: 2021-10-26 11:52:24 -0400 (Tue, 26 Oct 2021) |
| Back to Multiple platform build/check report for BioC 3.14 |
|
This page was generated on 2022-04-13 12:06:19 -0400 (Wed, 13 Apr 2022).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4324 |
| tokay2 | Windows Server 2012 R2 Standard | x64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4077 |
| machv2 | macOS 10.14.6 Mojave | x86_64 | 4.1.3 (2022-03-10) -- "One Push-Up" | 4137 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
|
To the developers/maintainers of the CGHbase package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CGHbase.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 286/2083 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| CGHbase 1.54.0 (landing page) Mark van de Wiel
| nebbiolo2 | Linux (Ubuntu 20.04.4 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: CGHbase |
| Version: 1.54.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CGHbase_1.54.0.tar.gz && rm -rf CGHbase.buildbin-libdir && mkdir CGHbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CGHbase.buildbin-libdir CGHbase_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CGHbase_1.54.0.zip && rm CGHbase_1.54.0.tar.gz CGHbase_1.54.0.zip |
| StartedAt: 2022-04-12 04:38:40 -0400 (Tue, 12 Apr 2022) |
| EndedAt: 2022-04-12 04:40:19 -0400 (Tue, 12 Apr 2022) |
| EllapsedTime: 99.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/CGHbase_1.54.0.tar.gz && rm -rf CGHbase.buildbin-libdir && mkdir CGHbase.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CGHbase.buildbin-libdir CGHbase_1.54.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL CGHbase_1.54.0.zip && rm CGHbase_1.54.0.tar.gz CGHbase_1.54.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
56 849k 56 478k 0 0 674k 0 0:00:01 --:--:-- 0:00:01 674k
100 849k 100 849k 0 0 843k 0 0:00:01 0:00:01 --:--:-- 843k
install for i386
* installing *source* package 'CGHbase' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'CGHbase'
finding HTML links ... done
CGHbase-package html
Wilting html
WiltingCalled html
WiltingNorm html
WiltingRaw html
WiltingRegions html
WiltingSeg html
avedist html
chromosomes html
class.cghCall html
class.cghRaw html
class.cghRegions html
class.cghSeg html
copynumber html
frequencyPlot html
frequencyPlotCalls html
make_cghRaw html
plot html
probloss html
regions html
summaryPlot html
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'CGHbase' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CGHbase' as CGHbase_1.54.0.zip
* DONE (CGHbase)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'CGHbase' successfully unpacked and MD5 sums checked