| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:21 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the sangeranalyseR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/sangeranalyseR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1668/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| sangeranalyseR 1.2.0 (landing page) Kuan-Hao Chao
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS |  | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: sangeranalyseR |
| Version: 1.2.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/sangeranalyseR_1.2.0.tar.gz && rm -rf sangeranalyseR.buildbin-libdir && mkdir sangeranalyseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sangeranalyseR.buildbin-libdir sangeranalyseR_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL sangeranalyseR_1.2.0.zip && rm sangeranalyseR_1.2.0.tar.gz sangeranalyseR_1.2.0.zip |
| StartedAt: 2021-10-14 09:35:45 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:37:21 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 96.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/sangeranalyseR_1.2.0.tar.gz && rm -rf sangeranalyseR.buildbin-libdir && mkdir sangeranalyseR.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sangeranalyseR.buildbin-libdir sangeranalyseR_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL sangeranalyseR_1.2.0.zip && rm sangeranalyseR_1.2.0.tar.gz sangeranalyseR_1.2.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
5 35.5M 5 1873k 0 0 2210k 0 0:00:16 --:--:-- 0:00:16 2209k
14 35.5M 14 5451k 0 0 2950k 0 0:00:12 0:00:01 0:00:11 2949k
17 35.5M 17 6546k 0 0 2298k 0 0:00:15 0:00:02 0:00:13 2298k
29 35.5M 29 10.5M 0 0 2796k 0 0:00:13 0:00:03 0:00:10 2796k
45 35.5M 45 16.1M 0 0 3403k 0 0:00:10 0:00:04 0:00:06 3403k
61 35.5M 61 21.7M 0 0 3792k 0 0:00:09 0:00:05 0:00:04 4060k
79 35.5M 79 28.4M 0 0 4234k 0 0:00:08 0:00:06 0:00:02 4706k
100 35.5M 100 35.5M 0 0 4663k 0 0:00:07 0:00:07 --:--:-- 6019k
install for i386
* installing *source* package 'sangeranalyseR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Note: wrong number of arguments to '=='
** help
*** installing help indices
converting help for package 'sangeranalyseR'
finding HTML links ... done
ChromatogramParam-class html
MakeBaseCalls-methods html
QualityReport-class-qualityBasePlot html
QualityReport-class-updateQualityParam
html
QualityReport-class html
SangerAlignment-class-generateReportSA
html
SangerAlignment-class-launchAppSA html
SangerAlignment-class-updateQualityParam
html
SangerAlignment-class-writeFastaSA html
SangerAlignment-class html
SangerAlignment html
SangerContig-class-generateReportSC html
SangerContig-class-launchAppSC html
SangerContig-class-updateQualityParam html
SangerContig-class-writeFastaSC html
SangerContig-class html
SangerContig html
SangerRead-class-MakeBaseCalls html
SangerRead-class-generateReportSR html
SangerRead-class-qualityBasePlot html
SangerRead-class-readTable html
SangerRead-class-updateQualityParam html
SangerRead-class-writeFastaSR html
SangerRead-class html
SangerRead html
generateReport html
generateReportSA-methods html
generateReportSC-methods html
generateReportSR-methods html
launchApp html
launchAppSA-methods html
launchAppSC-methods html
qualityBasePlot-methods html
qualityReportData html
readTable-methods html
sangerAlignmentData html
sangerContigData html
sangerReadFData html
sangeranalyseR html
updateQualityParam-methods html
writeFasta html
writeFastaSA-methods html
writeFastaSC-methods html
writeFastaSR-methods html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'sangeranalyseR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sangeranalyseR' as sangeranalyseR_1.2.0.zip
* DONE (sangeranalyseR)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'sangeranalyseR' successfully unpacked and MD5 sums checked