| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:20 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the rWikiPathways package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/rWikiPathways.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1659/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| rWikiPathways 1.12.0 (landing page) Egon Willighagen
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: rWikiPathways |
| Version: 1.12.0 |
| Command: rm -rf rWikiPathways.buildbin-libdir && mkdir rWikiPathways.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rWikiPathways.buildbin-libdir rWikiPathways_1.12.0.tar.gz |
| StartedAt: 2021-10-15 11:34:39 -0400 (Fri, 15 Oct 2021) |
| EndedAt: 2021-10-15 11:35:55 -0400 (Fri, 15 Oct 2021) |
| EllapsedTime: 76.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: rWikiPathways_1.12.0.zip |
| PackageFileSize: 2.836 MiB |
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### Running command:
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### rm -rf rWikiPathways.buildbin-libdir && mkdir rWikiPathways.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=rWikiPathways.buildbin-libdir rWikiPathways_1.12.0.tar.gz
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install for i386
* installing *source* package 'rWikiPathways' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'rWikiPathways'
finding HTML links ... done
downloadPathwayArchive html
findPathwayIdsByLiterature html
findPathwayIdsByText html
findPathwayIdsByXref html
findPathwayNamesByLiterature html
findPathwayNamesByText html
findPathwayNamesByXref html
findPathwayUrlsByLiterature html
findPathwayUrlsByText html
findPathwayUrlsByXref html
findPathwaysByLiterature html
findPathwaysByText html
findPathwaysByXref html
getCurationTagNames html
getCurationTags html
getEveryCurationTag html
getOntologyTermIds html
getOntologyTermNames html
getOntologyTerms html
getPathway html
getPathwayHistory html
getPathwayIdsByCurationTag html
getPathwayIdsByOntologyTerm html
getPathwayIdsByParentOntologyTerm html
getPathwayInfo html
getPathwaysByCurationTag html
getPathwaysByOntologyTerm html
getPathwaysByParentOntologyTerm html
getRecentChanges html
getRecentChangesIds html
getRecentChangesNames html
getXrefList html
listOrganisms html
listPathwayIds html
listPathwayNames html
listPathwayUrls html
listPathways html
readGMT html
readGMTnames html
readPathwayGMT html
wikipathwaysAPI html
wikipathwaysGET html
writeGMT html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'rWikiPathways' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'rWikiPathways' as rWikiPathways_1.12.0.zip
* DONE (rWikiPathways)