Hiroaki Kato
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/nuCpos |
| git_branch: RELEASE_3_13 |
| git_last_commit: 64a4e71 |
| git_last_commit_date: 2021-05-19 12:37:20 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:06:14 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the nuCpos package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/nuCpos.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1286/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| nuCpos 1.10.0 (landing page) Hiroaki Kato
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: nuCpos |
| Version: 1.10.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/nuCpos_1.10.0.tar.gz && rm -rf nuCpos.buildbin-libdir && mkdir nuCpos.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nuCpos.buildbin-libdir nuCpos_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL nuCpos_1.10.0.zip && rm nuCpos_1.10.0.tar.gz nuCpos_1.10.0.zip |
| StartedAt: 2021-10-14 06:52:46 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 06:56:14 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 208.3 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/nuCpos_1.10.0.tar.gz && rm -rf nuCpos.buildbin-libdir && mkdir nuCpos.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nuCpos.buildbin-libdir nuCpos_1.10.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL nuCpos_1.10.0.zip && rm nuCpos_1.10.0.tar.gz nuCpos_1.10.0.zip
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install for i386
* installing *source* package 'nuCpos' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c HBA_3.f90 -o HBA_3.o
"C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"c:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_nuCpos.c -o R_init_nuCpos.o
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c localHBA_3.f90 -o localHBA_3.o
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos2_1.f90 -o nuCpos2_1.o
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos2_2.f90 -o nuCpos2_2.o
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos_1.f90 -o nuCpos_1.o
"C:/rtools40/mingw32/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos_2.f90 -o nuCpos_2.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o nuCpos.dll tmp.def HBA_3.o R_init_nuCpos.o localHBA_3.o nuCpos2_1.o nuCpos2_2.o nuCpos_1.o nuCpos_2.o -Lc:/extsoft/lib/i386 -Lc:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/nuCpos.buildbin-libdir/00LOCK-nuCpos/00new/nuCpos/libs/i386
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'nuCpos'
finding HTML links ... done
HBA html
localHBA html
mutNuCpos html
nuCpos-package html
predNuCpos html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'nuCpos' ...
** libs
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c HBA_3.f90 -o HBA_3.o
"C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.13-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c R_init_nuCpos.c -o R_init_nuCpos.o
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c localHBA_3.f90 -o localHBA_3.o
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos2_1.f90 -o nuCpos2_1.o
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos2_2.f90 -o nuCpos2_2.o
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos_1.f90 -o nuCpos_1.o
"C:/rtools40/mingw64/bin/"gfortran -fno-optimize-sibling-calls -O2 -mfpmath=sse -msse2 -mstackrealign -c nuCpos_2.f90 -o nuCpos_2.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o nuCpos.dll tmp.def HBA_3.o R_init_nuCpos.o localHBA_3.o nuCpos2_1.o nuCpos2_2.o nuCpos_1.o nuCpos_2.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -lgfortran -lm -lquadmath -LC:/Users/BIOCBU~1/BBS-3~1.13-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.13-bioc/meat/nuCpos.buildbin-libdir/nuCpos/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'nuCpos' as nuCpos_1.10.0.zip
* DONE (nuCpos)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'nuCpos' successfully unpacked and MD5 sums checked