| Back to Multiple platform build/check report for BioC 3.13 |
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This page was generated on 2021-10-15 15:06:11 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the metagenomeFeatures package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/metagenomeFeatures.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1086/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Nathan D. Olson
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | ERROR | skipped | skipped | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: metagenomeFeatures |
| Version: 2.12.0 |
| Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/metagenomeFeatures_2.12.0.tar.gz && rm -rf metagenomeFeatures.buildbin-libdir && mkdir metagenomeFeatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metagenomeFeatures.buildbin-libdir metagenomeFeatures_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL metagenomeFeatures_2.12.0.zip && rm metagenomeFeatures_2.12.0.tar.gz metagenomeFeatures_2.12.0.zip |
| StartedAt: 2021-10-14 08:06:10 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 08:07:14 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 64.7 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/metagenomeFeatures_2.12.0.tar.gz && rm -rf metagenomeFeatures.buildbin-libdir && mkdir metagenomeFeatures.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metagenomeFeatures.buildbin-libdir metagenomeFeatures_2.12.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL metagenomeFeatures_2.12.0.zip && rm metagenomeFeatures_2.12.0.tar.gz metagenomeFeatures_2.12.0.zip
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% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
68 2640k 68 1798k 0 0 1984k 0 0:00:01 --:--:-- 0:00:01 1984k
100 2640k 100 2640k 0 0 2249k 0 0:00:01 0:00:01 --:--:-- 2250k
install for i386
* installing *source* package 'metagenomeFeatures' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'metagenomeFeatures'
finding HTML links ... done
MgDb-accessor html
MgDb-class html
MgDb-methods html
annotateFeatures-MgDb-method html
get_gg13.8_85MgDb html
make_mgdb_sqlite html
mgFeatures-accessors html
mgFeatures-class html
mgFeatures-methods html
mock_mgF html
mock_query_df html
newMgDb html
qiita_study_94_gg_ids html
reexports html
select-MgDb-method html
taxa_ html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'metagenomeFeatures' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package can be loaded from final location
Warning: Package 'metagenomeFeatures' is deprecated and will be removed from
Bioconductor version 3.14
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'metagenomeFeatures' ...
** testing if installed package can be loaded
Warning: Package 'metagenomeFeatures' is deprecated and will be removed from
Bioconductor version 3.14
* MD5 sums
packaged installation of 'metagenomeFeatures' as metagenomeFeatures_2.12.0.zip
* DONE (metagenomeFeatures)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'metagenomeFeatures' successfully unpacked and MD5 sums checked