Back to Multiple platform build/check report for BioC 3.13
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2021-10-15 15:06:10 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for megadepth on tokay2

To the developers/maintainers of the megadepth package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/megadepth.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1066/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
megadepth 1.2.3  (landing page)
David Zhang
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/megadepth
git_branch: RELEASE_3_13
git_last_commit: 844d5f2
git_last_commit_date: 2021-08-23 17:23:15 -0400 (Mon, 23 Aug 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    ERROR  
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: megadepth
Version: 1.2.3
Command: rm -rf megadepth.buildbin-libdir && mkdir megadepth.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=megadepth.buildbin-libdir megadepth_1.2.3.tar.gz
StartedAt: 2021-10-15 10:15:25 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 10:16:56 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 91.8 seconds
RetCode: 0
Status:   OK  
PackageFile: megadepth_1.2.3.zip
PackageFileSize: 491.7 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf megadepth.buildbin-libdir && mkdir megadepth.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=megadepth.buildbin-libdir megadepth_1.2.3.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'megadepth' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'megadepth'
    finding HTML links ... done
    bam_to_bigwig                           html  
    bam_to_junctions                        html  
    get_coverage                            html  
    install_megadepth                       html  
    megadepth_cmd                           html  
    process_junction_table                  html  
    read_coverage                           html  
    read_junction_table                     html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'megadepth' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'megadepth' as megadepth_1.2.3.zip
* DONE (megadepth)