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This page was generated on 2021-10-15 15:06:09 -0400 (Fri, 15 Oct 2021).

INSTALL results for lipidr on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/lipidr.git to
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raw results

Package 991/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
lipidr 2.6.0  (landing page)
Ahmed Mohamed
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/lipidr
git_branch: RELEASE_3_13
git_last_commit: 23f05f8
git_last_commit_date: 2021-05-19 12:43:14 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: lipidr
Version: 2.6.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/lipidr_2.6.0.tar.gz && rm -rf lipidr.buildbin-libdir && mkdir lipidr.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lipidr.buildbin-libdir lipidr_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL lipidr_2.6.0.zip && rm lipidr_2.6.0.tar.gz lipidr_2.6.0.zip
StartedAt: 2021-10-14 09:41:26 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 09:45:04 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 217.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/lipidr_2.6.0.tar.gz && rm -rf lipidr.buildbin-libdir && mkdir lipidr.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=lipidr.buildbin-libdir lipidr_2.6.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL lipidr_2.6.0.zip && rm lipidr_2.6.0.tar.gz lipidr_2.6.0.zip
###
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install for i386

* installing *source* package 'lipidr' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'lipidr'
    finding HTML links ... done
    LipidomicsExperiment-class              html  
    LipidomicsExperiment                    html  
    finding level-2 HTML links ... done

    add_sample_annotation                   html  
    annotate_lipids                         html  
    as_lipidomics_experiment                html  
    data_normalized                         html  
    de_analysis                             html  
    filter_by_cv                            html  
    gen_lipidsets                           html  
    impute_na                               html  
    lipidDefaults                           html  
    lipidnames_pattern                      html  
    lipidr-data                             html  
    lipidr-package                          html  
    lsea                                    html  
    mva                                     html  
    mw                                      html  
    non_parsed_molecules                    html  
    normalize_istd                          html  
    normalize_pqn                           html  
    pipe                                    html  
    plot_chain_distribution                 html  
    plot_heatmap                            html  
    plot_lipidclass                         html  
    plot_molecules                          html  
    plot_samples                            html  
    plot_trend                              html  
    read_skyline                            html  
    remove_non_parsed_molecules             html  
    set_attr                                html  
    summarize_transitions                   html  
    update_molecule_names                   html  
    use_interactive_graphics                html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'lipidr' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'lipidr' as lipidr_2.6.0.zip
* DONE (lipidr)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'lipidr' successfully unpacked and MD5 sums checked