| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:05:39 -0400 (Fri, 15 Oct 2021).
|
To the developers/maintainers of the enrichplot package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/enrichplot.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 574/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| enrichplot 1.12.3 (landing page) Guangchuang Yu
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: enrichplot |
| Version: 1.12.3 |
| Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:enrichplot.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings enrichplot_1.12.3.tar.gz |
| StartedAt: 2021-10-14 09:43:20 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 09:45:46 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 145.4 seconds |
| RetCode: 0 |
| Status: OK |
| CheckDir: enrichplot.Rcheck |
| Warnings: 0 |
##############################################################################
##############################################################################
###
### Running command:
###
### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD check --install=check:enrichplot.install-out.txt --library=/home/biocbuild/bbs-3.13-bioc/R/library --no-vignettes --timings enrichplot_1.12.3.tar.gz
###
##############################################################################
##############################################################################
* using log directory ‘/home/biocbuild/bbs-3.13-bioc/meat/enrichplot.Rcheck’
* using R version 4.1.1 (2021-08-10)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘enrichplot/DESCRIPTION’ ... OK
* this is package ‘enrichplot’ version ‘1.12.3’
* package encoding: UTF-8
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘enrichplot’ can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
ridgeplot 16.332 2.094 7.179
gseaplot 14.936 1.125 8.055
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ... SKIPPED
* checking re-building of vignette outputs ... SKIPPED
* checking PDF version of manual ... OK
* DONE
Status: OK
enrichplot.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL enrichplot ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’ * installing *source* package ‘enrichplot’ ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (enrichplot)
enrichplot.Rcheck/enrichplot-Ex.timings
| name | user | system | elapsed | |
| barplot.enrichResult | 1.657 | 0.072 | 1.728 | |
| cnetplot | 0.001 | 0.000 | 0.001 | |
| color_palette | 0.000 | 0.003 | 0.004 | |
| dotplot | 0.000 | 0.000 | 0.001 | |
| emapplot | 0.000 | 0.000 | 0.001 | |
| goplot | 0 | 0 | 0 | |
| gseaplot | 14.936 | 1.125 | 8.055 | |
| heatplot | 0.758 | 0.071 | 0.829 | |
| pairwise_termsim | 0.001 | 0.000 | 0.000 | |
| ridgeplot | 16.332 | 2.094 | 7.179 | |
| treeplot | 0.000 | 0.001 | 0.000 | |
| upsetplot-methods | 1.088 | 0.019 | 1.106 | |