Rafael A. Irizarry
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/affy |
| git_branch: RELEASE_3_13 |
| git_last_commit: 9c32d61 |
| git_last_commit_date: 2021-05-19 11:32:58 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:05:34 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the affy package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/affy.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 23/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| affy 1.70.0 (landing page) Rafael A. Irizarry
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: affy |
| Version: 1.70.0 |
| Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL affy |
| StartedAt: 2021-10-14 06:05:22 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 06:05:29 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 7.1 seconds |
| RetCode: 0 |
| Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD INSTALL affy ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.13-bioc/R/library’ * installing *source* package ‘affy’ ... ** using staged installation creating cache ./config.cache checking how to run the C preprocessor... cc -E checking for main in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.1.3... yes updating cache ./config.cache creating ./config.status creating src/Makevars ** libs gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/biocbuild/bbs-3.13-bioc/R/library/preprocessCore/include' -I/usr/local/include -fpic -g -O2 -Wall -c chipbackground.c -o chipbackground.o gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/biocbuild/bbs-3.13-bioc/R/library/preprocessCore/include' -I/usr/local/include -fpic -g -O2 -Wall -c getall_locations.c -o getall_locations.o gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/biocbuild/bbs-3.13-bioc/R/library/preprocessCore/include' -I/usr/local/include -fpic -g -O2 -Wall -c mas5calls.c -o mas5calls.o gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/biocbuild/bbs-3.13-bioc/R/library/preprocessCore/include' -I/usr/local/include -fpic -g -O2 -Wall -c rma2.c -o rma2.o gcc -I"/home/biocbuild/bbs-3.13-bioc/R/include" -DNDEBUG -DHAVE_ZLIB=1 -I'/home/biocbuild/bbs-3.13-bioc/R/library/preprocessCore/include' -I/usr/local/include -fpic -g -O2 -Wall -c rma_common.c -o rma_common.o gcc -shared -L/home/biocbuild/bbs-3.13-bioc/R/lib -L/usr/local/lib -o affy.so chipbackground.o getall_locations.o mas5calls.o rma2.o rma_common.o -lz -L/home/biocbuild/bbs-3.13-bioc/R/lib -lR installing to /home/biocbuild/bbs-3.13-bioc/R/library/00LOCK-affy/00new/affy/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (affy)