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This page was generated on 2021-10-15 15:06:22 -0400 (Fri, 15 Oct 2021).

BUILD BIN results for SIAMCAT on tokay2

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- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/SIAMCAT.git to
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raw results

Package 1754/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
SIAMCAT 1.12.0  (landing page)
Jakob Wirbel
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/SIAMCAT
git_branch: RELEASE_3_13
git_last_commit: fb65d54
git_last_commit_date: 2021-05-19 12:35:49 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: SIAMCAT
Version: 1.12.0
Command: rm -rf SIAMCAT.buildbin-libdir && mkdir SIAMCAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIAMCAT.buildbin-libdir SIAMCAT_1.12.0.tar.gz
StartedAt: 2021-10-15 11:47:33 -0400 (Fri, 15 Oct 2021)
EndedAt: 2021-10-15 11:48:51 -0400 (Fri, 15 Oct 2021)
EllapsedTime: 78.0 seconds
RetCode: 0
Status:   OK  
PackageFile: SIAMCAT_1.12.0.zip
PackageFileSize: 10.77 MiB

Command output

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###
### Running command:
###
###   rm -rf SIAMCAT.buildbin-libdir && mkdir SIAMCAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SIAMCAT.buildbin-libdir SIAMCAT_1.12.0.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'SIAMCAT' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'SIAMCAT'
    finding HTML links ... done
    SIAMCAT-package                         html  
    accessSlot                              html  
    add.meta.pred                           html  
    assign-associations                     html  
    assign-data_split                       html  
    assign-eval_data                        html  
    assign-filt_feat                        html  
    assign-label                            html  
    assign-meta                             html  
    assign-model_list                       html  
    assign-norm_feat                        html  
    assign-orig_feat                        html  
    assign-physeq                           html  
    assign-pred_matrix                      html  
    assoc_param-methods                     html  
    associations-methods                    html  
    check.associations                      html  
    check.confounders                       html  
    create.data.split                       html  
    create.label                            html  
    data_split-methods                      html  
    eval_data-methods                       html  
    evaluate.predictions                    html  
    feat.crc.zeller                         html  
    feature_type-methods                    html  
    feature_weights-methods                 html  
    filt_feat-methods                       html  
    filt_params-methods                     html  
    filter.features                         html  
    filter.label                            html  
    get.component.classes                   html  
    get.filt_feat.matrix                    html  
    get.norm_feat.matrix                    html  
    get.orig_feat.matrix                    html  
    label-methods                           html  
    make.predictions                        html  
    meta-methods                            html  
    meta.crc.zeller                         html  
    model.evaluation.plot                   html  
    model.interpretation.plot               html  
    model_list-methods                      html  
    model_type-methods                      html  
    models-methods                          html  
    norm_feat-methods                       html  
    norm_params-methods                     html  
    normalize.features                      html  
    orig_feat-methods                       html  
    parse.label.header                      html  
    physeq-methods                          html  
    pred_matrix-methods                     html  
    read.label                              html  
    read.lefse                              html  
    select.samples                          html  
    show-methods                            html  
    siamcat-class                           html  
    siamcat                                 html  
REDIRECT:topic	 Previous alias or file overwritten by alias: C:/Users/biocbuild/bbs-3.13-bioc/meat/SIAMCAT.buildbin-libdir/00LOCK-SIAMCAT/00new/SIAMCAT/help/siamcat.html
    siamcat.to.lefse                        html  
    siamcat.to.maaslin                      html  
    siamcat_example                         html  
    summarize.features                      html  
    finding level-2 HTML links ... done

    train.model                             html  
    validate.data                           html  
    weight_matrix-methods                   html  
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'SIAMCAT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SIAMCAT' as SIAMCAT_1.12.0.zip
* DONE (SIAMCAT)