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This page was generated on 2021-10-15 15:06:11 -0400 (Fri, 15 Oct 2021).

INSTALL results for MesKit on tokay2

To the developers/maintainers of the MesKit package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/MesKit.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
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raw results

Package 1074/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
MesKit 1.2.0  (landing page)
Mengni Liu
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/MesKit
git_branch: RELEASE_3_13
git_last_commit: faa3f2a
git_last_commit_date: 2021-05-19 12:54:10 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: MesKit
Version: 1.2.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/MesKit_1.2.0.tar.gz && rm -rf MesKit.buildbin-libdir && mkdir MesKit.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MesKit.buildbin-libdir MesKit_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL MesKit_1.2.0.zip && rm MesKit_1.2.0.tar.gz MesKit_1.2.0.zip
StartedAt: 2021-10-14 09:28:20 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 09:29:15 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 55.1 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/MesKit_1.2.0.tar.gz && rm -rf MesKit.buildbin-libdir && mkdir MesKit.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MesKit.buildbin-libdir MesKit_1.2.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL MesKit_1.2.0.zip && rm MesKit_1.2.0.tar.gz MesKit_1.2.0.zip
###
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##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
100 1799k  100 1799k    0     0  2674k      0 --:--:-- --:--:-- --:--:-- 2677k

install for i386

* installing *source* package 'MesKit' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'MesKit'
    finding HTML links ... done
    Maf-class                               html  
    MafList-class                           html  
    calFst                                  html  
    calJSI                                  html  
    calNeiDist                              html  
    ccfAUC                                  html  
    classifyMut                             html  
    cna2gene                                html  
    compareCCF                              html  
    compareTree                             html  
    fitSignatures                           html  
    getBinaryMatrix                         html  
    getBootstrapValue                       html  
    getBranchType                           html  
    getCCFMatrix                            html  
    getMafData                              html  
    getMafPatient                           html  
    getMafRef                               html  
    getMutBranches                          html  
    getNonSyn_vc                            html  
    getPhyloTree                            html  
    getPhyloTreePatient                     html  
    getPhyloTreeRef                         html  
    getPhyloTreeTsbLabel                    html  
    getSampleInfo                           html  
    getTree                                 html  
    getTreeMethod                           html  
    mathScore                               html  
    mutCluster                              html  
    mutHeatmap                              html  
    mutTrunkBranch                          html  
    phyloTree-class                         html  
    phyloTreeList-class                     html  
    plotCNA                                 html  
    plotMutProfile                          html  
    plotMutSigProfile                       html  
    plotPhyloTree                           html  
    readMaf                                 html  
    readSegment                             html  
    runMesKit                               html  
    subMaf                                  html  
    testNeutral                             html  
    triMatrix                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'MesKit' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'MesKit' as MesKit_1.2.0.zip
* DONE (MesKit)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'MesKit' successfully unpacked and MD5 sums checked