Back to Multiple platform build/check report for BioC 3.13
ABCDEFG[H]IJKLMNOPQRSTUVWXYZ

This page was generated on 2021-10-15 15:06:07 -0400 (Fri, 15 Oct 2021).

BUILD results for HCAExplorer on tokay2

To the developers/maintainers of the HCAExplorer package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HCAExplorer.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 843/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
HCAExplorer 1.6.0  (landing page)
Bioconductor Package Maintainer
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/HCAExplorer
git_branch: RELEASE_3_13
git_last_commit: 7b9e6f8
git_last_commit_date: 2021-05-19 12:48:08 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    ERROR  skipped
tokay2Windows Server 2012 R2 Standard / x64  ERROR    ERROR  skippedskipped
machv2macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: HCAExplorer
Version: 1.6.0
Command: chmod a+r HCAExplorer -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data HCAExplorer
StartedAt: 2021-10-14 14:50:04 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 14:50:58 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 54.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r HCAExplorer -R && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data HCAExplorer
###
##############################################################################
##############################################################################


* checking for file 'HCAExplorer/DESCRIPTION' ... OK
* preparing 'HCAExplorer':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'HCAExplorer.Rmd' using knitr
Loading required package: dplyr

Attaching package: 'dplyr'

The following objects are masked from 'package:stats':

    filter, lag

The following objects are masked from 'package:base':

    intersect, setdiff, setequal, union

Warning: Package 'HCAExplorer' is deprecated and will be removed from
  Bioconductor version 3.14
Quitting from lines 114-116 (HCAExplorer.Rmd) 
Error: processing vignette 'HCAExplorer.Rmd' failed with diagnostics:
Could not resolve host: service.explore.data.humancellatlas.org
--- failed re-building 'HCAExplorer.Rmd'

SUMMARY: processing the following file failed:
  'HCAExplorer.Rmd'

Error: Vignette re-building failed.
Execution halted