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This page was generated on 2021-10-15 15:05:59 -0400 (Fri, 15 Oct 2021).

INSTALL results for CellBench on tokay2

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raw results

Package 259/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CellBench 1.8.0  (landing page)
Shian Su
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/CellBench
git_branch: RELEASE_3_13
git_last_commit: aa35afe
git_last_commit_date: 2021-05-19 12:41:27 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CellBench
Version: 1.8.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CellBench_1.8.0.tar.gz && rm -rf CellBench.buildbin-libdir && mkdir CellBench.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellBench.buildbin-libdir CellBench_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CellBench_1.8.0.zip && rm CellBench_1.8.0.tar.gz CellBench_1.8.0.zip
StartedAt: 2021-10-14 09:58:23 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 10:02:11 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 228.6 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CellBench_1.8.0.tar.gz && rm -rf CellBench.buildbin-libdir && mkdir CellBench.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CellBench.buildbin-libdir CellBench_1.8.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CellBench_1.8.0.zip && rm CellBench_1.8.0.tar.gz CellBench_1.8.0.zip
###
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100 3036k  100 3036k    0     0  1944k      0  0:00:01  0:00:01 --:--:-- 1944k

install for i386

* installing *source* package 'CellBench' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CellBench'
    finding HTML links ... done
    CellBench-package                       html  
    all_unique                              html  
    any_task_errors                         html  
    apply_methods                           html  
    arrow_sep                               html  
    as_pipeline_list                        html  
    cache_method                            html  
    cellbench_case_study                    html  
    cellbench_file                          html  
    check_class                             html  
    clear_cached_datasets                   html  
    clear_cellbench_cache                   html  
    data_list                               html  
    filter_zero_genes                       html  
    fn_arg_seq                              html  
    fn_list                                 html  
    is.task_error                           html  
    keep_high_count_cells                   html  
    keep_high_count_genes                   html  
    keep_high_var_genes                     html  
    load_all_data                           html  
    mhead                                   html  
    pipeline_collapse                       html  
    print.fn_arg_seq                        html  
    print.task_error                        html  
    sample_cells                            html  
    sample_genes                            html  
    sample_sce_data                         html  
    set_cellbench_bpparam                   html  
    set_cellbench_cache_path                html  
    set_cellbench_threads                   html  
    strip_timing                            html  
    summary.benchmark_tbl                   html  
    time_methods                            html  
    unpack_timing                           html  
** building package indices
** installing vignettes
   'DataManipulation.Rmd' using 'UTF-8' 
   'Introduction.Rmd' using 'UTF-8' 
   'TidyversePatterns.Rmd' using 'UTF-8' 
   'Timing.Rmd' using 'UTF-8' 
   'WritingWrappers.Rmd' using 'UTF-8' 
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CellBench' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CellBench' as CellBench_1.8.0.zip
* DONE (CellBench)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CellBench' successfully unpacked and MD5 sums checked