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This page was generated on 2021-10-15 15:06:01 -0400 (Fri, 15 Oct 2021).

INSTALL results for CNVrd2 on tokay2

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raw results

Package 354/2041HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNVrd2 1.30.0  (landing page)
Hoang Tan Nguyen
Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021)
git_url: https://git.bioconductor.org/packages/CNVrd2
git_branch: RELEASE_3_13
git_last_commit: 0a3ceac
git_last_commit_date: 2021-05-19 12:01:50 -0400 (Wed, 19 May 2021)
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CNVrd2
Version: 1.30.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CNVrd2_1.30.0.tar.gz && rm -rf CNVrd2.buildbin-libdir && mkdir CNVrd2.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVrd2.buildbin-libdir CNVrd2_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CNVrd2_1.30.0.zip && rm CNVrd2_1.30.0.tar.gz CNVrd2_1.30.0.zip
StartedAt: 2021-10-14 10:20:55 -0400 (Thu, 14 Oct 2021)
EndedAt: 2021-10-14 10:22:03 -0400 (Thu, 14 Oct 2021)
EllapsedTime: 67.2 seconds
RetCode: 0
Status:   OK  

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.165/BBS/3.13/bioc/src/contrib/CNVrd2_1.30.0.tar.gz && rm -rf CNVrd2.buildbin-libdir && mkdir CNVrd2.buildbin-libdir && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CNVrd2.buildbin-libdir CNVrd2_1.30.0.tar.gz && C:\Users\biocbuild\bbs-3.13-bioc\R\bin\R.exe CMD INSTALL CNVrd2_1.30.0.zip && rm CNVrd2_1.30.0.tar.gz CNVrd2_1.30.0.zip
###
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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
 15 2261k   15  358k    0     0  1040k      0  0:00:02 --:--:--  0:00:02 1039k
100 2261k  100 2261k    0     0  1871k      0  0:00:01  0:00:01 --:--:-- 1873k

install for i386

* installing *source* package 'CNVrd2' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'CNVrd2'
    finding HTML links ... done
    CNVrd2-class                            html  
    CNVrd2-package                          html  
    calculateLDSNPandCNV                    html  
    ccl3l1data                              html  
    clusteringCNVs-class                    html  
    countReadInWindow-methods               html  
    countReadInWindow                       html  
    emnormalCNV-methods                     html  
    emnormalCNV                             html  
    fcgr3bMXL                               html  
    groupBayesianCNVs                       html  
    groupCNVs-methods                       html  
    groupCNVs                               html  
    identifyPolymorphicRegion-methods       html  
    identifyPolymorphicRegion               html  
    numericOrNULL-class                     html  
    plotCNVrd2-methods                      html  
    plotCNVrd2                              html  
    plotPolymorphicRegion-methods           html  
    plotPolymorphicRegion                   html  
    searchGroupCNVs-methods                 html  
    searchGroupCNVs                         html  
    segmentSamples-methods                  html  
    segmentSamples                          html  
    segmentSamplesUsingPopInformation-methods
                                            html  
    segmentSamplesUsingPopInformation       html  
    vectorORfactor-class                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'CNVrd2' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'CNVrd2' as CNVrd2_1.30.0.zip
* DONE (CNVrd2)
* installing to library 'C:/Users/biocbuild/bbs-3.13-bioc/R/library'
package 'CNVrd2' successfully unpacked and MD5 sums checked