H. Pagès
| Snapshot Date: 2021-10-14 04:50:12 -0400 (Thu, 14 Oct 2021) |
| git_url: https://git.bioconductor.org/packages/BSgenome |
| git_branch: RELEASE_3_13 |
| git_last_commit: 6643064 |
| git_last_commit_date: 2021-05-19 11:37:32 -0400 (Wed, 19 May 2021) |
| Back to Multiple platform build/check report for BioC 3.13 |
|
This page was generated on 2021-10-15 15:05:36 -0400 (Fri, 15 Oct 2021).
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To the developers/maintainers of the BSgenome package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/BSgenome.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 217/2041 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| BSgenome 1.60.0 (landing page) H. Pagès
| nebbiolo1 | Linux (Ubuntu 20.04.2 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: BSgenome |
| Version: 1.60.0 |
| Command: /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome |
| StartedAt: 2021-10-14 06:50:43 -0400 (Thu, 14 Oct 2021) |
| EndedAt: 2021-10-14 06:52:17 -0400 (Thu, 14 Oct 2021) |
| EllapsedTime: 94.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: BSgenome_1.60.0.tar.gz |
| PackageFileSize: 5.769 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.13-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data BSgenome ### ############################################################################## ############################################################################## * checking for file ‘BSgenome/DESCRIPTION’ ... OK * preparing ‘BSgenome’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... OK * checking for LF line-endings in source and make files and shell scripts * checking for empty or unneeded directories WARNING: directory ‘BSgenome/inst/pkgtemplates/BSgenome_datapkg/inst/extdata’ is empty WARNING: directory ‘BSgenome/inst/pkgtemplates/MaskedBSgenome_datapkg/inst/extdata’ is empty * building ‘BSgenome_1.60.0.tar.gz’ Warning in utils::tar(filepath, pkgname, compression = compression, compression_level = 9L, : storing paths of more than 100 bytes is not portable: ‘BSgenome/inst/extdata/GentlemanLab/BSgenome.Gmellonella.NCBI.ASM364042v2-tools/fasta_to_sorted_2bit.R’