Back to Workflows build report for BioC 3.12

INSTALL report for ExpressionNormalizationWorkflow on malbec1

This page was generated on 2021-05-07 15:45:15 -0400 (Fri, 07 May 2021).

To the developers/maintainers of the ExpressionNormalizationWorkflow package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 11/28HostnameOS / ArchINSTALLBUILD
ExpressionNormalizationWorkflow 1.16.0  (landing page)
Karthikeyan Murugesan
Snapshot Date: 2021-05-07 09:00:02 -0400 (Fri, 07 May 2021)
URL: https://git.bioconductor.org/packages/ExpressionNormalizationWorkflow
Branch: RELEASE_3_12
Last Commit: f2152af
Last Changed Date: 2020-10-27 09:40:57 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: ExpressionNormalizationWorkflow
Version: 1.16.0
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL ExpressionNormalizationWorkflow
StartedAt: 2021-05-07 09:06:19 -0400 (Fri, 07 May 2021)
EndedAt: 2021-05-07 09:06:41 -0400 (Fri, 07 May 2021)
EllapsedTime: 22.3 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL ExpressionNormalizationWorkflow
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’
* installing *source* package ‘ExpressionNormalizationWorkflow’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning: replacing previous import ‘Biobase::anyMissing’ by ‘matrixStats::anyMissing’ when loading ‘ExpressionNormalizationWorkflow’
Warning: replacing previous import ‘Biobase::rowMedians’ by ‘matrixStats::rowMedians’ when loading ‘ExpressionNormalizationWorkflow’
** help
Warning: /home/biocbuild/bbs-3.12-workflows/meat/ExpressionNormalizationWorkflow/man/ExpressionNormalizationWorkflow-package.Rd:29: All text must be in a section
Warning: /home/biocbuild/bbs-3.12-workflows/meat/ExpressionNormalizationWorkflow/man/ExpressionNormalizationWorkflow-package.Rd:30: All text must be in a section
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: replacing previous import ‘Biobase::anyMissing’ by ‘matrixStats::anyMissing’ when loading ‘ExpressionNormalizationWorkflow’
Warning: replacing previous import ‘Biobase::rowMedians’ by ‘matrixStats::rowMedians’ when loading ‘ExpressionNormalizationWorkflow’
** testing if installed package can be loaded from final location
Warning: replacing previous import ‘Biobase::anyMissing’ by ‘matrixStats::anyMissing’ when loading ‘ExpressionNormalizationWorkflow’
Warning: replacing previous import ‘Biobase::rowMedians’ by ‘matrixStats::rowMedians’ when loading ‘ExpressionNormalizationWorkflow’
** testing if installed package keeps a record of temporary installation path
* DONE (ExpressionNormalizationWorkflow)