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This page was generated on 2021-05-06 14:10:06 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the clustifyrdatahub package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 67/398 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
clustifyrdatahub 1.0.0 (landing page) Rui Fu
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | ||||||||
Package: clustifyrdatahub |
Version: 1.0.0 |
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:clustifyrdatahub.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings clustifyrdatahub_1.0.0.tar.gz |
StartedAt: 2021-05-06 11:46:56 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 11:49:22 -0400 (Thu, 06 May 2021) |
EllapsedTime: 146.3 seconds |
RetCode: 0 |
Status: OK |
CheckDir: clustifyrdatahub.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:clustifyrdatahub.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings clustifyrdatahub_1.0.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.12-data-experiment/meat/clustifyrdatahub.Rcheck’ * using R version 4.0.5 (2021-03-31) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘clustifyrdatahub/DESCRIPTION’ ... OK * this is package ‘clustifyrdatahub’ version ‘1.0.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘clustifyrdatahub’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: OK
clustifyrdatahub.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL clustifyrdatahub ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘clustifyrdatahub’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location snapshotDate(): 2020-10-27 ** testing if installed package can be loaded from final location snapshotDate(): 2020-10-27 ** testing if installed package keeps a record of temporary installation path * DONE (clustifyrdatahub)
clustifyrdatahub.Rcheck/clustifyrdatahub-Ex.timings
name | user | system | elapsed | |
ref_MCA | 1.072 | 0.020 | 1.363 | |
ref_cortex_dev | 1.064 | 0.028 | 1.383 | |
ref_hema_microarray | 1.132 | 0.016 | 1.447 | |
ref_immgen | 1.124 | 0.000 | 1.430 | |
ref_moca_main | 1.04 | 0.02 | 1.33 | |
ref_mouse.rnaseq | 1.080 | 0.024 | 1.395 | |
ref_mouse_atlas | 1.192 | 0.008 | 1.496 | |
ref_pan_indrop | 1.204 | 0.024 | 1.511 | |
ref_pan_smartseq2 | 1.324 | 0.008 | 1.627 | |
ref_tabula_muris_drop | 1.120 | 0.012 | 1.407 | |
ref_tabula_muris_facs | 1.136 | 0.020 | 1.465 | |