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This page was generated on 2021-05-06 14:10:11 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the KEGGandMetacoreDzPathwaysGEO package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 195/398 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | ||||||||
KEGGandMetacoreDzPathwaysGEO 1.10.0 (landing page) Gaurav Bhatti
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | ||||||||
Package: KEGGandMetacoreDzPathwaysGEO |
Version: 1.10.0 |
Command: /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:KEGGandMetacoreDzPathwaysGEO.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings KEGGandMetacoreDzPathwaysGEO_1.10.0.tar.gz |
StartedAt: 2021-05-06 12:16:16 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 12:17:10 -0400 (Thu, 06 May 2021) |
EllapsedTime: 54.4 seconds |
RetCode: 0 |
Status: OK |
CheckDir: KEGGandMetacoreDzPathwaysGEO.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD check --install=check:KEGGandMetacoreDzPathwaysGEO.install-out.txt --library=/home/biocbuild/bbs-3.12-bioc/R/library --no-vignettes --timings KEGGandMetacoreDzPathwaysGEO_1.10.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.12-data-experiment/meat/KEGGandMetacoreDzPathwaysGEO.Rcheck’ * using R version 4.0.5 (2021-03-31) * using platform: x86_64-pc-linux-gnu (64-bit) * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘KEGGandMetacoreDzPathwaysGEO/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘KEGGandMetacoreDzPathwaysGEO’ version ‘1.10.0’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘KEGGandMetacoreDzPathwaysGEO’ can be installed ... OK * checking installed package size ... NOTE installed size is 98.7Mb sub-directories of 1Mb or more: data 98.5Mb * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.12-data-experiment/meat/KEGGandMetacoreDzPathwaysGEO.Rcheck/00check.log’ for details.
KEGGandMetacoreDzPathwaysGEO.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.12-bioc/R/bin/R CMD INSTALL KEGGandMetacoreDzPathwaysGEO ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.12-bioc/R/library’ * installing *source* package ‘KEGGandMetacoreDzPathwaysGEO’ ... ** using staged installation ** data ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (KEGGandMetacoreDzPathwaysGEO)
KEGGandMetacoreDzPathwaysGEO.Rcheck/KEGGandMetacoreDzPathwaysGEO-Ex.timings
name | user | system | elapsed | |
GSE1145 | 0.356 | 0.008 | 0.368 | |
GSE11906 | 2.840 | 0.056 | 2.900 | |
GSE14924_CD4 | 0.244 | 0.000 | 0.244 | |
GSE14924_CD8 | 0.240 | 0.000 | 0.239 | |
GSE16759 | 0.324 | 0.000 | 0.325 | |
GSE19420 | 0.220 | 0.012 | 0.229 | |
GSE20164 | 0.064 | 0.004 | 0.070 | |
GSE22780 | 0.208 | 0.012 | 0.217 | |
GSE23878 | 0.748 | 0.016 | 0.765 | |
GSE24739_G0 | 0.440 | 0.008 | 0.446 | |
GSE24739_G1 | 0.444 | 0.004 | 0.448 | |
GSE30153 | 0.532 | 0.012 | 0.545 | |
GSE32676 | 0.720 | 0.008 | 0.727 | |
GSE38666_epithelia | 0.328 | 0.008 | 0.336 | |
GSE38666_stroma | 0.216 | 0.000 | 0.214 | |
GSE4183 | 0.240 | 0.000 | 0.243 | |
GSE42057 | 0.928 | 0.016 | 0.947 | |
GSE7305 | 0.684 | 0.004 | 0.686 | |
KEGGandMetacoreDzPathwaysGEO-package | 0.588 | 0.020 | 0.619 | |