Hao Chen
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/uSORT |
| Branch: RELEASE_3_12 |
| Last Commit: 48962a5 |
| Last Changed Date: 2020-10-27 11:17:51 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:34:08 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the uSORT package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1927/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| uSORT 1.16.0 (landing page) Hao Chen
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: uSORT |
| Version: 1.16.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/uSORT_1.16.0.tar.gz && rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=uSORT.buildbin-libdir uSORT_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL uSORT_1.16.0.zip && rm uSORT_1.16.0.tar.gz uSORT_1.16.0.zip |
| StartedAt: 2021-05-05 19:12:20 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:13:45 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 85.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/uSORT_1.16.0.tar.gz && rm -rf uSORT.buildbin-libdir && mkdir uSORT.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=uSORT.buildbin-libdir uSORT_1.16.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL uSORT_1.16.0.zip && rm uSORT_1.16.0.tar.gz uSORT_1.16.0.zip
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install for i386
* installing *source* package 'uSORT' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Note: break used in wrong context: no loop is visible
** help
*** installing help indices
converting help for package 'uSORT'
finding HTML links ... done
EXP_to_CellDataSet html
Rwanderlust html
SPIN html
STS_sorting html
STS_sorting_wrapper html
STS_sortingcost html
autoSPIN html
clusterGenes1 html
compareModels1 html
diff_test_helper1 html
differentialGeneTest1 html
distance.function html
driving_force_gene_selection html
elbow_detection html
fluidigmSC_analyzeGeneDetection html
fluidigmSC_identifyExpOutliers html
fluidigmSC_isElementIgnoreCase html
fluidigmSC_readLinearExp html
fluidigmSC_removeGenesByLinearExpForAllType
html
fluidigmSC_removeGenesByLinearExpForAllType_log2
html
monocle_wrapper html
neighborhood_sorting html
neighborhood_sorting_wrapper html
neighborhood_sortingcost html
pca_gene_selection html
sWanderlust html
scattering_quantification_per_gene html
sorting_method_parameter_GUI html
summed_local_variance html
summed_local_variance_cyclical html
summed_local_variance_linear html
trajectory_landmarks html
uSORT html
uSORT_GUI html
uSORT_parameters_GUI html
uSORT_preProcess html
uSORT_sorting_wrapper html
uSORT_write_results html
variability_per_gene html
wanderlust_wrapper html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'uSORT' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'uSORT' as uSORT_1.16.0.zip
* DONE (uSORT)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'uSORT' successfully unpacked and MD5 sums checked