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BUILD BIN report for synergyfinder on tokay1

This page was generated on 2021-05-06 12:33:53 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the synergyfinder package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1828/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
synergyfinder 2.4.16  (landing page)
Shuyu Zheng
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/synergyfinder
Branch: RELEASE_3_12
Last Commit: 5d572fb
Last Changed Date: 2021-04-21 10:12:08 -0400 (Wed, 21 Apr 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: synergyfinder
Version: 2.4.16
Command: rm -rf synergyfinder.buildbin-libdir && mkdir synergyfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=synergyfinder.buildbin-libdir synergyfinder_2.4.16.tar.gz
StartedAt: 2021-05-06 10:14:16 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 10:15:08 -0400 (Thu, 06 May 2021)
EllapsedTime: 52.0 seconds
RetCode: 0
Status:   OK   
PackageFile: synergyfinder_2.4.16.zip
PackageFileSize: 412.1 KiB

Command output

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###
### Running command:
###
###   rm -rf synergyfinder.buildbin-libdir && mkdir synergyfinder.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=synergyfinder.buildbin-libdir synergyfinder_2.4.16.tar.gz
###
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install for i386

* installing *source* package 'synergyfinder' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'synergyfinder'
    finding HTML links ... done
    Bliss                                   html  
    CalculateCSS                            html  
    CalculateIC50                           html  
    CalculateSens                           html  
    CalculateSensitivity                    html  
    CalculateSynergy                        html  
    CorrectBaseLine                         html  
    DimensionReduction                      html  
    ExtractSingleDrug                       html  
    FindModelPar                            html  
    FindModelType                           html  
    FitDoseResponse                         html  
    GenerateSurface                         html  
    HSA                                     html  
    HighlightBarPlot                        html  
    ImputeIC50                              html  
    Loewe                                   html  
    NCATS_screening_data                    html  
    ONEIL_screening_data                    html  
    Plot2DrugContour                        html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/Plot2DrugContour.Rd:73: file link 'wireframe' in package 'lattice' does not exist and so has been treated as a topic
    Plot2DrugHeatmap                        html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/Plot2DrugHeatmap.Rd:79: file link 'wireframe' in package 'lattice' does not exist and so has been treated as a topic
    Plot2DrugSurface                        html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/Plot2DrugSurface.Rd:87: file link 'wireframe' in package 'lattice' does not exist and so has been treated as a topic
    PlotBarometer                           html  
    PlotDoseResponse                        html  
    PlotDoseResponseCurve                   html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/PlotDoseResponseCurve.Rd:73: file link 'plot.new' in package 'graphics' does not exist and so has been treated as a topic
    PlotMultiDrugBar                        html  
    PlotMultiDrugSurface                    html  
    PlotSensitiveSynergy                    html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/PlotSensitiveSynergy.Rd:43: file link 'wireframe' in package 'lattice' does not exist and so has been treated as a topic
    PlotSynergy                             html  
    PredictModelSpecify                     html  
    PredictResponse                         html  
    ReshapeData                             html  
    ZIP                                     html  
    dot-AdjustColumnName                    html  
    dot-Bootstrapping                       html  
    dot-Distance                            html  
    dot-ExtendedScores                      html  
    dot-Extract2DrugPlotData                html  
    dot-ExtractMultiDrugPlotData            html  
    dot-Pt2mm                               html  
    dot-RoundValues                         html  
    dot-ScoreCurve                          html  
    dot-ScoreCurve_L4                       html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-ScoreCurve_L4.Rd:10: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-ScoreCurve_L4.Rd:13: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-ScoreCurve_L4.Rd:16: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-ScoreCurve_L4.Rd:19: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
    dot-SolveExpDoesL4                      html  
    dot-SolveExpDoesLL4                     html  
    dot-SolveExpDose                        html  
    dot-SolveLoewe                          html  
    dot-own_log                             html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-own_log.Rd:11: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-own_log.Rd:14: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-own_log.Rd:17: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
    dot-own_log2                            html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpaoQqlf/R.INSTALL3ddc2c44db7/synergyfinder/man/dot-own_log2.Rd:11: file link 'L.4' in package 'drc' does not exist and so has been treated as a topic
    mathews_screening_data                  html  
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'synergyfinder' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'synergyfinder' as synergyfinder_2.4.16.zip
* DONE (synergyfinder)