Koen Van den Berge
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/stageR |
| Branch: RELEASE_3_12 |
| Last Commit: 1f3fac2 |
| Last Changed Date: 2020-10-27 11:29:09 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:48 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the stageR package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1795/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| stageR 1.12.0 (landing page) Koen Van den Berge
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: stageR |
| Version: 1.12.0 |
| Command: rm -rf stageR.buildbin-libdir && mkdir stageR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=stageR.buildbin-libdir stageR_1.12.0.tar.gz |
| StartedAt: 2021-05-06 10:12:23 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 10:13:09 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 45.5 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: stageR_1.12.0.zip |
| PackageFileSize: 1.038 MiB |
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### Running command:
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### rm -rf stageR.buildbin-libdir && mkdir stageR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=stageR.buildbin-libdir stageR_1.12.0.tar.gz
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install for i386
* installing *source* package 'stageR' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'stageR'
finding HTML links ... done
adjustedAlphaLevel html
esetProstate html
getAdjustedPValues html
finding level-2 HTML links ... done
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpwLb5sG/R.INSTALL1a682fae6ae0/stageR/man/getAdjustedPValues.Rd:34: missing link 'stageWiseAdjustment,stageR,character,numeric-method'
getAlpha html
getMethod html
getPConfirmation html
getPScreen html
getResults html
getSignificantGenes html
getSignificantTx html
getTx2gene html
hammer.eset html
isAdjusted html
isPScreenAdjusted html
stageR html
stageRClass html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpwLb5sG/R.INSTALL1a682fae6ae0/stageR/man/stageRClass.Rd:19: missing link 'getAdjustedPValues,stageR,logical,logical-method'
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpwLb5sG/R.INSTALL1a682fae6ae0/stageR/man/stageRClass.Rd:19: missing link 'getResults,stageR-method'
stageRTx html
stageWiseAdjustment html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'stageR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'stageR' as stageR_1.12.0.zip
* DONE (stageR)