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BUILD BIN report for sincell on tokay1

This page was generated on 2021-05-06 12:33:39 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the sincell package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1722/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
sincell 1.22.0  (landing page)
Miguel Julia , Antonio Rausell
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/sincell
Branch: RELEASE_3_12
Last Commit: d286cd9
Last Changed Date: 2020-10-27 11:02:22 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: sincell
Version: 1.22.0
Command: rm -rf sincell.buildbin-libdir && mkdir sincell.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sincell.buildbin-libdir sincell_1.22.0.tar.gz
StartedAt: 2021-05-06 10:08:20 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 10:09:18 -0400 (Thu, 06 May 2021)
EllapsedTime: 58.9 seconds
RetCode: 0
Status:   OK   
PackageFile: sincell_1.22.0.zip
PackageFileSize: 1.707 MiB

Command output

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###
### Running command:
###
###   rm -rf sincell.buildbin-libdir && mkdir sincell.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=sincell.buildbin-libdir sincell_1.22.0.tar.gz
###
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install for i386

* installing *source* package 'sincell' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c pseudoreplicatesbymodel.cpp -o pseudoreplicatesbymodel.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c pseudoreplicatesbynoise.cpp -o pseudoreplicatesbynoise.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c pseudoreplicatesbynoise_cv2.cpp -o pseudoreplicatesbynoise_cv2.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c sstalgorithm.cpp -o sstalgorithm.o
sstalgorithm.cpp: In function 'Rcpp::NumericVector sstalgorithm(Rcpp::NumericVector, int, Rcpp::NumericMatrix)':
sstalgorithm.cpp:28:10: warning: 'disty' may be used uninitialized in this function [-Wmaybe-uninitialized]
   out[2] = disty;
sstalgorithm.cpp:27:10: warning: 'distx' may be used uninitialized in this function [-Wmaybe-uninitialized]
   out[1] = distx;
C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o sincell.dll tmp.def RcppExports.o pseudoreplicatesbymodel.o pseudoreplicatesbynoise.o pseudoreplicatesbynoise_cv2.o sstalgorithm.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/sincell.buildbin-libdir/00LOCK-sincell/00new/sincell/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'sincell'
    finding HTML links ... done
    ExpressionMatrix                        html  
    f_distance2vector                       html  
    geneset.list                            html  
    knnalgorithm                            html  
    pseudoreplicatesbymodel                 html  
    pseudoreplicatesbynoise                 html  
    pseudoreplicatesbynoise_cv2             html  
    sc_AssociationOfCellsHierarchyWithAGeneSet
                                            html  
    sc_ComparissonOfGraphs                  html  
    sc_DimensionalityReductionObj           html  
    sc_GraphBuilderObj                      html  
    sc_InSilicoCellsReplicatesObj           html  
    sc_InitializingSincellObject            html  
    sc_StatisticalSupportByGeneSubsampling
                                            html  
    sc_StatisticalSupportByReplacementWithInSilicoCellsReplicates
                                            html  
    sc_clusterObj                           html  
    sc_distanceObj                          html  
    sc_marker2color                         html  
    sstalgorithm                            html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'sincell' ...
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c pseudoreplicatesbymodel.cpp -o pseudoreplicatesbymodel.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c pseudoreplicatesbynoise.cpp -o pseudoreplicatesbynoise.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c pseudoreplicatesbynoise_cv2.cpp -o pseudoreplicatesbynoise_cv2.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c sstalgorithm.cpp -o sstalgorithm.o
sstalgorithm.cpp: In function 'Rcpp::NumericVector sstalgorithm(Rcpp::NumericVector, int, Rcpp::NumericMatrix)':
sstalgorithm.cpp:28:10: warning: 'disty' may be used uninitialized in this function [-Wmaybe-uninitialized]
   out[2] = disty;
sstalgorithm.cpp:27:10: warning: 'distx' may be used uninitialized in this function [-Wmaybe-uninitialized]
   out[1] = distx;
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o sincell.dll tmp.def RcppExports.o pseudoreplicatesbymodel.o pseudoreplicatesbynoise.o pseudoreplicatesbynoise_cv2.o sstalgorithm.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/sincell.buildbin-libdir/sincell/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'sincell' as sincell_1.22.0.zip
* DONE (sincell)