##############################################################################
##############################################################################
###
### Running command:
###
###   C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch sapFinder
###
##############################################################################
##############################################################################


* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
* installing *source* package 'sapFinder' ...
** using staged installation
** libs
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11  -I"C:/Users/biocbuild/bbs-3.12-bioc/R/include" -DNDEBUG  -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include'   -I"C:/extsoft/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign -c dataHandle.cpp -o dataHandle.o
C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o sapFinder.dll tmp.def dataHandle.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/biocbuild/bbs-3.12-bioc/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.12-bioc/R/library/00LOCK-sapFinder/00new/sapFinder/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
Warning message:
Package 'rTANDEM' is deprecated and will be removed from Bioconductor
  version 3.13 
** help
*** installing help indices
  converting help for package 'sapFinder'
    finding HTML links ... done
    dbCreator                               html  
    easyRun                                 html  
    parserGear                              html  
    reportCreator                           html  
    runTandem                               html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'rTANDEM' is deprecated and will be removed from Bioconductor
  version 3.13
Warning: Package 'sapFinder' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'rTANDEM' is deprecated and will be removed from Bioconductor
  version 3.13
Warning: Package 'sapFinder' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package keeps a record of temporary installation path
* DONE (sapFinder)
Making 'packages.html' ... done