Jan Oosting
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/quantsmooth |
| Branch: RELEASE_3_12 |
| Last Commit: 6635ed8 |
| Last Changed Date: 2020-10-27 10:29:04 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:03 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the quantsmooth package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1434/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| quantsmooth 1.56.0 (landing page) Jan Oosting
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: quantsmooth |
| Version: 1.56.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/quantsmooth_1.56.0.tar.gz && rm -rf quantsmooth.buildbin-libdir && mkdir quantsmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=quantsmooth.buildbin-libdir quantsmooth_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL quantsmooth_1.56.0.zip && rm quantsmooth_1.56.0.tar.gz quantsmooth_1.56.0.zip |
| StartedAt: 2021-05-05 16:57:48 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 16:58:43 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 55.2 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/quantsmooth_1.56.0.tar.gz && rm -rf quantsmooth.buildbin-libdir && mkdir quantsmooth.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=quantsmooth.buildbin-libdir quantsmooth_1.56.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL quantsmooth_1.56.0.zip && rm quantsmooth_1.56.0.tar.gz quantsmooth_1.56.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 106k 100 106k 0 0 2104k 0 --:--:-- --:--:-- --:--:-- 2128k
install for i386
* installing *source* package 'quantsmooth' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
Warning message:
In .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
converting help for package 'quantsmooth'
finding HTML links ... done
Chromosome14 html
chrom.bands html
drawSimpleChrom html
getChangedIdx html
getChangedRegions html
getLambdaMin html
grid.chromosome html
lengthChromosome html
numericCHR html
paintCytobands html
plotChromosome html
plotSmoothed html
position2Cytoband html
prepareGenomePlot html
quantsmooth html
quantsmooth.cv html
quantsmooth.seg html
scaleto html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'quantsmooth' ...
** testing if installed package can be loaded
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
* MD5 sums
packaged installation of 'quantsmooth' as quantsmooth_1.56.0.zip
* DONE (quantsmooth)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'quantsmooth' successfully unpacked and MD5 sums checked