Matthias Döring
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/openPrimeR |
| Branch: RELEASE_3_12 |
| Last Commit: cf7a7af |
| Last Changed Date: 2020-11-14 11:32:07 -0400 (Sat, 14 Nov 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:32:38 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the openPrimeR package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1269/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| openPrimeR 1.12.1 (landing page) Matthias Döring
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: openPrimeR |
| Version: 1.12.1 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/openPrimeR_1.12.1.tar.gz && rm -rf openPrimeR.buildbin-libdir && mkdir openPrimeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=openPrimeR.buildbin-libdir openPrimeR_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL openPrimeR_1.12.1.zip && rm openPrimeR_1.12.1.tar.gz openPrimeR_1.12.1.zip |
| StartedAt: 2021-05-05 17:34:52 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:38:28 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 216.4 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/openPrimeR_1.12.1.tar.gz && rm -rf openPrimeR.buildbin-libdir && mkdir openPrimeR.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=openPrimeR.buildbin-libdir openPrimeR_1.12.1.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL openPrimeR_1.12.1.zip && rm openPrimeR_1.12.1.tar.gz openPrimeR_1.12.1.zip
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install for i386
* installing *source* package 'openPrimeR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'openPrimeR'
finding HTML links ... done
AnalysisStats html
Data html
Input html
Output html
Plots html
PrimerDesign html
PrimerEval html
Primers-method html
Scoring html
Settings html
Templates-method html
TemplatesFunctions html
check_cvg_constraints html
create_report-Primers-Templates-method
html
create_report-list-list-method html
filterLimits-methods html
filters-methods html
get_cvg_stats-Primers-method html
get_cvg_stats-list-method html
openPrimeR-package html
plot_constraint-Primers-method html
plot_constraint-list-method html
plot_constraint_deviation-Primers-method
html
plot_constraint_deviation-list-method html
plot_constraint_fulfillment-Primers-method
html
plot_constraint_fulfillment-list-method
html
plot_cvg_constraints-Primers-method html
plot_cvg_constraints-list-method html
plot_primer_binding_regions-Primers-Templates-method
html
plot_primer_binding_regions-list-list-method
html
plot_primer_cvg-Primers-Templates-method
html
plot_primer_cvg-list-list-method html
plot_template_cvg-Primers-Templates-method
html
plot_template_cvg-list-list-method html
runTutorial html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'openPrimeR' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'openPrimeR' as openPrimeR_1.12.1.zip
* DONE (openPrimeR)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'openPrimeR' successfully unpacked and MD5 sums checked