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BUILD BIN report for muscat on tokay1

This page was generated on 2021-05-06 12:32:24 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the muscat package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1186/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
muscat 1.4.0  (landing page)
Helena L. Crowell
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/muscat
Branch: RELEASE_3_12
Last Commit: f9eef39
Last Changed Date: 2020-10-27 11:48:47 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version exists in internal repository
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version exists in internal repository
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version exists in internal repository

Summary

Package: muscat
Version: 1.4.0
Command: rm -rf muscat.buildbin-libdir && mkdir muscat.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=muscat.buildbin-libdir muscat_1.4.0.tar.gz
StartedAt: 2021-05-06 09:36:47 -0400 (Thu, 06 May 2021)
EndedAt: 2021-05-06 09:37:43 -0400 (Thu, 06 May 2021)
EllapsedTime: 56.7 seconds
RetCode: 0
Status:   OK   
PackageFile: muscat_1.4.0.zip
PackageFileSize: 5.281 MiB

Command output

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###
### Running command:
###
###   rm -rf muscat.buildbin-libdir && mkdir muscat.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=muscat.buildbin-libdir muscat_1.4.0.tar.gz
###
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install for i386

* installing *source* package 'muscat' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.2
Current Matrix version is 1.3.3
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** help
*** installing help indices
  converting help for package 'muscat'
    finding HTML links ... done
    aggregateData                           html  
    calcExprFreqs                           html  
    data                                    html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpE7l7Ni/R.INSTALL32ec25b764d0/muscat/man/data.Rd:26: file link 'logNormCounts' in package 'scater' does not exist and so has been treated as a topic
    mmDS                                    html  
    pbDS                                    html  
    pbFlatten                               html  
    pbHeatmap                               html  
    finding level-2 HTML links ... done

    pbMDS                                   html  
    prepSCE                                 html  
    prepSim                                 html  
    resDS                                   html  
    simData                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.2
Current Matrix version is 1.3.3
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** testing if installed package can be loaded from final location
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.2
Current Matrix version is 1.3.3
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'muscat' ...
** testing if installed package can be loaded
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.3.2
Current Matrix version is 1.3.3
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
* MD5 sums
packaged installation of 'muscat' as muscat_1.4.0.zip
* DONE (muscat)