Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:32:12 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the metavizr package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1061/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
metavizr 1.14.0 (landing page) Hector Corrada Bravo
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: metavizr |
Version: 1.14.0 |
Command: rm -rf metavizr.buildbin-libdir && mkdir metavizr.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metavizr.buildbin-libdir metavizr_1.14.0.tar.gz |
StartedAt: 2021-05-06 09:29:44 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 09:31:07 -0400 (Thu, 06 May 2021) |
EllapsedTime: 82.4 seconds |
RetCode: 0 |
Status: OK |
PackageFile: metavizr_1.14.0.zip |
PackageFileSize: 2.399 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf metavizr.buildbin-libdir && mkdir metavizr.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=metavizr.buildbin-libdir metavizr_1.14.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'metavizr' ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone' ** help *** installing help indices converting help for package 'metavizr' finding HTML links ... done EpivizMetagenomicsData-class html EpivizMetagenomicsDataInnerNodes-class html EpivizMetagenomicsDataTimeSeries-class html MetavizApp-class html MetavizGraph-class html MetavizGraphInnerNodes-class html buildMetavizGraph html buildMetavizGraphInnerNodes html generateSelection html metavizControl html register-MRexperiment-method html register-phyloseq-method html finding level-2 HTML links ... done replaceNAFeatures html setMetavizStandalone html startMetaviz html Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpojDIai/R.INSTALL27605e6863a7/metavizr/man/startMetaviz.Rd:5: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpojDIai/R.INSTALL27605e6863a7/metavizr/man/startMetaviz.Rd:21: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpojDIai/R.INSTALL27605e6863a7/metavizr/man/startMetaviz.Rd:18: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpojDIai/R.INSTALL27605e6863a7/metavizr/man/startMetaviz.Rd:30: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic startMetavizStandalone html Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpojDIai/R.INSTALL27605e6863a7/metavizr/man/startMetavizStandalone.Rd:5: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpojDIai/R.INSTALL27605e6863a7/metavizr/man/startMetavizStandalone.Rd:22: file link 'MetavizApp' in package 'metavizr' does not exist and so has been treated as a topic validateObject html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone' ** testing if installed package can be loaded from final location Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone' ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'metavizr' ... ** testing if installed package can be loaded Warning: replacing previous import 'S4Vectors::merge' by 'git2r::merge' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::head' by 'git2r::head' when loading 'epivizrStandalone' Warning: replacing previous import 'S4Vectors::as.data.frame' by 'git2r::as.data.frame' when loading 'epivizrStandalone' * MD5 sums packaged installation of 'metavizr' as metavizr_1.14.0.zip * DONE (metavizr)