Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:32:06 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the makecdfenv package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 994/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
makecdfenv 1.66.0 (landing page) James W. MacDonald
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | ![]() | ||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | ![]() | ||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | ![]() | ||||||||
Package: makecdfenv |
Version: 1.66.0 |
Command: rm -rf makecdfenv.buildbin-libdir && mkdir makecdfenv.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=makecdfenv.buildbin-libdir makecdfenv_1.66.0.tar.gz |
StartedAt: 2021-05-06 09:26:02 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 09:26:45 -0400 (Thu, 06 May 2021) |
EllapsedTime: 42.1 seconds |
RetCode: 0 |
Status: OK |
PackageFile: makecdfenv_1.66.0.zip |
PackageFileSize: 3.326 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf makecdfenv.buildbin-libdir && mkdir makecdfenv.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=makecdfenv.buildbin-libdir makecdfenv_1.66.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'makecdfenv' ... ** using staged installation ********************************************** WARNING: this package has a configure script It probably needs manual configuration ********************************************** ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/include" -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -DHAVE_ZLIB -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c read_cdffile.c -o read_cdffile.o read_cdffile.c: In function 'readQC': read_cdffile.c:576:7: warning: variable 'typeQC' set but not used [-Wunused-but-set-variable] int typeQC; ^~~~~~ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o makecdfenv.dll tmp.def read_cdffile.o -LC:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/libs/i386 -lzlib1bioc -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/makecdfenv.buildbin-libdir/00LOCK-makecdfenv/00new/makecdfenv/libs/i386 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'makecdfenv' finding HTML links ... done Cdf-class html getInfoInAffyFile html make.cdf.env html make.cdf.package html pmormm html read.cdffile html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'makecdfenv' ... ********************************************** WARNING: this package has a configure script It probably needs manual configuration ********************************************** ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/include" -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -DHAVE_ZLIB -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c read_cdffile.c -o read_cdffile.o read_cdffile.c: In function 'readQC': read_cdffile.c:576:7: warning: variable 'typeQC' set but not used [-Wunused-but-set-variable] int typeQC; ^~~~~~ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o makecdfenv.dll tmp.def read_cdffile.o -LC:/Users/biocbuild/bbs-3.12-bioc/R/library/zlibbioc/libs/x64 -lzlib1bioc -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/makecdfenv.buildbin-libdir/makecdfenv/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'makecdfenv' as makecdfenv_1.66.0.zip * DONE (makecdfenv)