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INSTALL report for dittoSeq on tokay1

This page was generated on 2021-05-06 12:30:58 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the dittoSeq package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 488/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
dittoSeq 1.2.6  (landing page)
Daniel Bunis
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/dittoSeq
Branch: RELEASE_3_12
Last Commit: cbf2618
Last Changed Date: 2021-04-15 16:12:07 -0400 (Thu, 15 Apr 2021)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    ERROR  skipped
tokay1Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: dittoSeq
Version: 1.2.6
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/dittoSeq_1.2.6.tar.gz && rm -rf dittoSeq.buildbin-libdir && mkdir dittoSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=dittoSeq.buildbin-libdir dittoSeq_1.2.6.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL dittoSeq_1.2.6.zip && rm dittoSeq_1.2.6.tar.gz dittoSeq_1.2.6.zip
StartedAt: 2021-05-05 17:50:25 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 17:51:09 -0400 (Wed, 05 May 2021)
EllapsedTime: 43.3 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/dittoSeq_1.2.6.tar.gz && rm -rf dittoSeq.buildbin-libdir && mkdir dittoSeq.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=dittoSeq.buildbin-libdir dittoSeq_1.2.6.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL dittoSeq_1.2.6.zip && rm dittoSeq_1.2.6.tar.gz dittoSeq_1.2.6.zip
###
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100 1002k  100 1002k    0     0  3180k      0 --:--:-- --:--:-- --:--:-- 3194k

install for i386

* installing *source* package 'dittoSeq' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'dittoSeq'
    finding HTML links ... done
    Darken                                  html  
    DittoSeq                                html  
    Lighten                                 html  
    Simulate                                html  
    addDimReduction                         html  
    finding level-2 HTML links ... done

    addPrcomp                               html  
    demux.SNP.summary                       html  
    demux.calls.summary                     html  
    demuxlet.example                        html  
    dittoBarPlot                            html  
    dittoColors                             html  
    dittoDimPlot                            html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpmWDT45/R.INSTALL1498371d7058/dittoSeq/man/dittoDimPlot.Rd:225: file link 'linetype' in package 'ggplot2' does not exist and so has been treated as a topic
    dittoDotPlot                            html  
    dittoHeatmap                            html  
    dittoHex                                html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpmWDT45/R.INSTALL1498371d7058/dittoSeq/man/dittoHex.Rd:206: file link 'linetype' in package 'ggplot2' does not exist and so has been treated as a topic
    dittoPlot                               html  
    dittoPlotVarsAcrossGroups               html  
    dittoScatterPlot                        html  
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpmWDT45/R.INSTALL1498371d7058/dittoSeq/man/dittoScatterPlot.Rd:168: file link 'linetype' in package 'ggplot2' does not exist and so has been treated as a topic
    gene                                    html  
    getGenes                                html  
    getMetas                                html  
    getReductions                           html  
    importDemux                             html  
    importDittoBulk                         html  
    isBulk                                  html  
    isGene                                  html  
    isMeta                                  html  
    meta                                    html  
    metaLevels                              html  
    multi_dittoDimPlot                      html  
    multi_dittoDimPlotVaryCells             html  
    multi_dittoPlot                         html  
    setBulk                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'dittoSeq' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'dittoSeq' as dittoSeq_1.2.6.zip
* DONE (dittoSeq)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'dittoSeq' successfully unpacked and MD5 sums checked