Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:30:31 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the crossmeta package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 400/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
crossmeta 1.16.1 (landing page) Alex Pickering
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: crossmeta |
Version: 1.16.1 |
Command: rm -rf crossmeta.buildbin-libdir && mkdir crossmeta.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=crossmeta.buildbin-libdir crossmeta_1.16.1.tar.gz |
StartedAt: 2021-05-06 08:49:38 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 08:50:23 -0400 (Thu, 06 May 2021) |
EllapsedTime: 45.7 seconds |
RetCode: 0 |
Status: OK |
PackageFile: crossmeta_1.16.1.zip |
PackageFileSize: 2.786 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf crossmeta.buildbin-libdir && mkdir crossmeta.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=crossmeta.buildbin-libdir crossmeta_1.16.1.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'crossmeta' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'crossmeta' finding HTML links ... done addContrastInput html add_adjusted html add_sources html bulkAnnot html bulkAnnotInput html bulkForm html bulkFormInput html bulkPage html bulkPageUI html bulkTable html bulkTableOuput html ch2_subset html delContrastsInput html diff_expr html es_meta html Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpas12hR/R.INSTALL37502314344a/crossmeta/man/es_meta.Rd:38: file link 'zScores' in package 'GeneMeta' does not exist and so has been treated as a topic exprs.MA html Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpas12hR/R.INSTALL37502314344a/crossmeta/man/exprs.MA.Rd:17: file link 'plotDensities.MAList' in package 'limma' does not exist and so has been treated as a topic Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/Rtmpas12hR/R.INSTALL37502314344a/crossmeta/man/exprs.MA.Rd:17: file link 'exprs.MA' in package 'limma' does not exist and so has been treated as a topic fix_illum_headers html finding level-2 HTML links ... done format_dl_annot html format_up_annot html get_ch2_mod html get_group_levels html get_palette html get_raw html get_sva_mods html gs.names html gslist html ilmn.nnum html iqr_replicates html is_invertible html load_agil_plat html load_diff html load_raw html open_raw_illum html phenoData.ch2 html prefix_illum_headers html query_ref html run_select_contrasts html run_sva html setup_prev html symbol_annot html to_eset html to_ma html validate_up_annot html which_max_iqr html xls_to_txt html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'crossmeta' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'crossmeta' as crossmeta_1.16.1.zip * DONE (crossmeta)