Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:29:49 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the adSplit package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 21/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
adSplit 1.60.0 (landing page) Claudio Lottaz
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: adSplit |
Version: 1.60.0 |
Command: rm -rf adSplit.buildbin-libdir && mkdir adSplit.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adSplit.buildbin-libdir adSplit_1.60.0.tar.gz |
StartedAt: 2021-05-06 08:22:13 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 08:24:25 -0400 (Thu, 06 May 2021) |
EllapsedTime: 132.6 seconds |
RetCode: 0 |
Status: OK |
PackageFile: adSplit_1.60.0.zip |
PackageFileSize: 475.1 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf adSplit.buildbin-libdir && mkdir adSplit.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=adSplit.buildbin-libdir adSplit_1.60.0.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'adSplit' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c adSplit.cpp -o adSplit.o adSplit.cpp: In function 'double tscore(double*, int, int, split&, isis_pars&)': adSplit.cpp:256:77: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] throw Tomato(__LINE__, "tscore: internal error, shame on the programmer"); ^ adSplit.cpp: In function 'void isis(char**, double*, int*, int*, int*, int*, int*, double*, int*)': adSplit.cpp:469:67: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] throw Tomato(__LINE__, "isis() called with unknown function"); ^ C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o adSplit.dll tmp.def adSplit.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/adSplit.buildbin-libdir/00LOCK-adSplit/00new/adSplit/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'adSplit' finding HTML links ... done adSplit-internal html adSplit html diana2means html drawRandomPS html golubKEGGSplits html hist.splitSet html image.splitSet html makeEID2PROBESenv html print.split html print.splitSet html randomDiana2means html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'adSplit' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c adSplit.cpp -o adSplit.o adSplit.cpp: In function 'double tscore(double*, int, int, split&, isis_pars&)': adSplit.cpp:256:77: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] throw Tomato(__LINE__, "tscore: internal error, shame on the programmer"); ^ adSplit.cpp: In function 'void isis(char**, double*, int*, int*, int*, int*, int*, double*, int*)': adSplit.cpp:469:67: warning: ISO C++ forbids converting a string constant to 'char*' [-Wwrite-strings] throw Tomato(__LINE__, "isis() called with unknown function"); ^ C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o adSplit.dll tmp.def adSplit.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/adSplit.buildbin-libdir/adSplit/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'adSplit' as adSplit_1.60.0.zip * DONE (adSplit)