Neil Ari Wijetunga
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/SMITE |
| Branch: RELEASE_3_12 |
| Last Commit: 7c95087 |
| Last Changed Date: 2020-10-27 11:11:05 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:33:41 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the SMITE package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1739/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| SMITE 1.18.0 (landing page) Neil Ari Wijetunga
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: SMITE |
| Version: 1.18.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/SMITE_1.18.0.tar.gz && rm -rf SMITE.buildbin-libdir && mkdir SMITE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SMITE.buildbin-libdir SMITE_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL SMITE_1.18.0.zip && rm SMITE_1.18.0.tar.gz SMITE_1.18.0.zip |
| StartedAt: 2021-05-05 18:00:09 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:01:21 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 72.1 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/SMITE_1.18.0.tar.gz && rm -rf SMITE.buildbin-libdir && mkdir SMITE.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=SMITE.buildbin-libdir SMITE_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL SMITE_1.18.0.zip && rm SMITE_1.18.0.tar.gz SMITE_1.18.0.zip
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install for i386
* installing *source* package 'SMITE' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'SMITE'
finding HTML links ... done
Reactome.Symbol.Igraph html
SMITE-package html
addShadowText html
annotateExpression html
annotateModification html
convertGeneIds html
curated_expression html
extractExpression html
extractGOseq html
extractModification html
extractModules html
extractScores html
genes_for_conversiontest html
hg19_gene_bed html
highScores html
histone_h3k4me1 html
makePvalueAnnotation html
makePvalueObject html
methylationdata html
normalizePval html
plotCompareScores html
plotDensityPval html
plotModule html
removeModification html
runBioNet html
runGOseq html
runSpinglass html
scorePval html
stoufferTest html
test_annotation_score_data html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'SMITE' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'SMITE' as SMITE_1.18.0.zip
* DONE (SMITE)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'SMITE' successfully unpacked and MD5 sums checked