Britta Velten
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/MOFA |
| Branch: RELEASE_3_12 |
| Last Commit: 0ae14cf |
| Last Changed Date: 2021-02-08 07:46:11 -0400 (Mon, 08 Feb 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:32:19 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the MOFA package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1133/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
Britta Velten
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: MOFA |
| Version: 1.6.2 |
| Command: rm -rf MOFA.buildbin-libdir && mkdir MOFA.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=MOFA.buildbin-libdir MOFA_1.6.2.tar.gz |
| StartedAt: 2021-05-06 09:33:45 -0400 (Thu, 06 May 2021) |
| EndedAt: 2021-05-06 09:34:22 -0400 (Thu, 06 May 2021) |
| EllapsedTime: 37.1 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: MOFA_1.6.2.zip |
| PackageFileSize: 2.042 MiB |
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### Running command:
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### rm -rf MOFA.buildbin-libdir && mkdir MOFA.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe --arch x64 CMD INSTALL --no-multiarch --build --library=MOFA.buildbin-libdir MOFA_1.6.2.tar.gz
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* installing *source* package 'MOFA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'MOFA'
finding HTML links ... done
DataOptions html
Dimensions html
Expectations html
FeatureIntercepts html
ImputedData html
InputData html
MOFA html
MOFAmodel html
ModelOptions html
Status html
TrainData html
TrainOptions html
TrainStats html
calculateVarianceExplained html
clusterSamples html
compareFactors html
compareModels html
createMOFAobject html
finding level-2 HTML links ... done
factorNames html
featureNames html
getCovariates html
getDefaultDataOptions html
getDefaultModelOptions html
getDefaultTrainOptions html
getDimensions html
getELBO html
getExpectations html
getFactors html
getImputedData html
getTrainData html
getWeights html
impute html
loadModel html
makeExampleData html
plotDataHeatmap html
plotDataOverview html
plotDataScatter html
plotEnrichment html
plotEnrichmentBars html
plotEnrichmentDetailed html
plotEnrichmentHeatmap html
plotFactorBeeswarm html
plotFactorCor html
plotFactorHist html
plotFactorScatter html
plotFactorScatters html
plotTopWeights html
plotVarianceExplained html
plotWeights html
plotWeightsHeatmap html
predict html
prepareMOFA html
qualityControl html
regressCovariates html
runEnrichmentAnalysis html
runMOFA html
sampleNames html
selectModel html
subsetFactors html
subsetSamples html
subsetViews html
trainCurveELBO html
trainCurveFactors html
viewNames html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Please use MOFA2 instead of MOFA. Package 'MOFA' is deprecated and
will be removed from Bioconductor version 3.13. Please see
replacement package MOFA2.
** testing if installed package can be loaded from final location
Warning: Please use MOFA2 instead of MOFA. Package 'MOFA' is deprecated and
will be removed from Bioconductor version 3.13. Please see
replacement package MOFA2.
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'MOFA' as MOFA_1.6.2.zip
* DONE (MOFA)