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This page was generated on 2021-05-06 12:32:10 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the MEDME package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 1033/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
MEDME 1.50.0 (landing page) Mattia Pelizzola
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |||||||||
Package: MEDME |
Version: 1.50.0 |
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/MEDME_1.50.0.tar.gz && rm -rf MEDME.buildbin-libdir && mkdir MEDME.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MEDME.buildbin-libdir MEDME_1.50.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL MEDME_1.50.0.zip && rm MEDME_1.50.0.tar.gz MEDME_1.50.0.zip |
StartedAt: 2021-05-05 19:01:26 -0400 (Wed, 05 May 2021) |
EndedAt: 2021-05-05 19:02:11 -0400 (Wed, 05 May 2021) |
EllapsedTime: 45.0 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/MEDME_1.50.0.tar.gz && rm -rf MEDME.buildbin-libdir && mkdir MEDME.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=MEDME.buildbin-libdir MEDME_1.50.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL MEDME_1.50.0.zip && rm MEDME_1.50.0.tar.gz MEDME_1.50.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 266k 100 266k 0 0 5024k 0 --:--:-- --:--:-- --:--:-- 5122k install for i386 * installing *source* package 'MEDME' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c MEDMEweight.c -o MEDMEweight.o MEDMEweight.c: In function 'MEDMEweight': MEDMEweight.c:78:12: warning: 'weight' may be used uninitialized in this function [-Wmaybe-uninitialized] weightSum = weightSum + weight; ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ MEDMEweight.c:91:42: warning: 'Max' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] > Max) {AMSfinal[i] = Max;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:92:42: warning: 'Min' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] < Min) {AMSfinal[i] = Min;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:90:33: warning: 'E' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ MEDMEweight.c:90:47: warning: 'D' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~^~~~~~~ MEDMEweight.c:90:63: warning: 'C' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~~~~^~~~ MEDMEweight.c:90:33: warning: 'B' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o MEDME.dll tmp.def MEDMEweight.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/MEDME.buildbin-libdir/00LOCK-MEDME/00new/MEDME/libs/i386 ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'MEDME' finding HTML links ... done CGcount html MEDME html MEDME.predict html MEDME.readFiles html MEDME.writeFiles html MEDMEset-class html smooth html testMEDMEset html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'MEDME' ... ** libs "C:/rtools40/mingw64/bin/"gcc -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I"C:/extsoft/include" -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c MEDMEweight.c -o MEDMEweight.o MEDMEweight.c: In function 'MEDMEweight': MEDMEweight.c:78:12: warning: 'weight' may be used uninitialized in this function [-Wmaybe-uninitialized] weightSum = weightSum + weight; ~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~ MEDMEweight.c:91:42: warning: 'Max' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] > Max) {AMSfinal[i] = Max;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:92:42: warning: 'Min' may be used uninitialized in this function [-Wmaybe-uninitialized] if(AMSfinal[i] < Min) {AMSfinal[i] = Min;} ~~~~~~~~~~~~^~~~~ MEDMEweight.c:90:33: warning: 'E' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ MEDMEweight.c:90:47: warning: 'D' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~^~~~~~~ MEDMEweight.c:90:63: warning: 'C' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ~~~~~~^~~~ MEDMEweight.c:90:33: warning: 'B' may be used uninitialized in this function [-Wmaybe-uninitialized] AMSfinal[i] = pow(2, pow( pow(E,B) * (D - Mlim) / (Mlim - C), 1/B)); ^~~~~~~~ C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o MEDME.dll tmp.def MEDMEweight.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/MEDME.buildbin-libdir/MEDME/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'MEDME' as MEDME_1.50.0.zip * DONE (MEDME) * installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library' package 'MEDME' successfully unpacked and MD5 sums checked