Marzia A Cremona
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/IWTomics |
| Branch: RELEASE_3_12 |
| Last Commit: f304876 |
| Last Changed Date: 2020-10-27 11:19:54 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:54 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the IWTomics package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 931/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| IWTomics 1.14.0 (landing page) Marzia A Cremona
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| Package: IWTomics |
| Version: 1.14.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/IWTomics_1.14.0.tar.gz && rm -rf IWTomics.buildbin-libdir && mkdir IWTomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IWTomics.buildbin-libdir IWTomics_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL IWTomics_1.14.0.zip && rm IWTomics_1.14.0.tar.gz IWTomics_1.14.0.zip |
| StartedAt: 2021-05-05 19:11:23 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 19:12:10 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 47.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/IWTomics_1.14.0.tar.gz && rm -rf IWTomics.buildbin-libdir && mkdir IWTomics.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=IWTomics.buildbin-libdir IWTomics_1.14.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL IWTomics_1.14.0.zip && rm IWTomics_1.14.0.tar.gz IWTomics_1.14.0.zip
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install for i386
* installing *source* package 'IWTomics' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for 'smooth' in package 'IWTomics'
** help
*** installing help indices
converting help for package 'IWTomics'
finding HTML links ... done
ETn_example html
IWTomics-internal html
IWTomics-package html
IWTomicsData-class html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsData-class.Rd:60: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsData-class.Rd:135: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsData-class.Rd:168: file link 'read.delim' in package 'utils' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsData-class.Rd:308: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsData-class.Rd:309: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
IWTomicsTest html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsTest.Rd:61: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsTest.Rd:64: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsTest.Rd:79: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/IWTomicsTest.Rd:80: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
features_example html
plot-IWTomicsData html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/plot-IWTomicsData.Rd:96: file link 'smooth' in package 'IWTomics' does not exist and so has been treated as a topic
plotSummary html
plotTest html
regionsFeatures_center html
regionsFeatures_scale html
regions_example html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/regions_example.Rd:19: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/regions_example.Rd:15: file link 'GRangesList' in package 'GenomicRanges' does not exist and so has been treated as a topic
smooth-IWTomicsData html
Rd warning: C:/Users/biocbuild/bbs-3.12-bioc/tmpdir/RtmpMP9Kvp/R.INSTALL2bd854509f0/IWTomics/man/smooth-IWTomicsData.Rd:78: file link 'plot' in package 'IWTomics' does not exist and so has been treated as a topic
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'IWTomics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'IWTomics' as IWTomics_1.14.0.zip
* DONE (IWTomics)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'IWTomics' successfully unpacked and MD5 sums checked