Andrea Calabria
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/ISAnalytics |
| Branch: RELEASE_3_12 |
| Last Commit: a1014e7 |
| Last Changed Date: 2021-04-08 08:11:42 -0400 (Thu, 08 Apr 2021) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:52 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the ISAnalytics package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 913/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ISAnalytics 1.0.11 (landing page) Andrea Calabria
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: ISAnalytics |
| Version: 1.0.11 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/ISAnalytics_1.0.11.tar.gz && rm -rf ISAnalytics.buildbin-libdir && mkdir ISAnalytics.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ISAnalytics.buildbin-libdir ISAnalytics_1.0.11.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ISAnalytics_1.0.11.zip && rm ISAnalytics_1.0.11.tar.gz ISAnalytics_1.0.11.zip |
| StartedAt: 2021-05-05 18:42:37 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:43:36 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 58.9 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/ISAnalytics_1.0.11.tar.gz && rm -rf ISAnalytics.buildbin-libdir && mkdir ISAnalytics.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=ISAnalytics.buildbin-libdir ISAnalytics_1.0.11.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL ISAnalytics_1.0.11.zip && rm ISAnalytics_1.0.11.tar.gz ISAnalytics_1.0.11.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 1712k 100 1712k 0 0 40.6M 0 --:--:-- --:--:-- --:--:-- 41.8M
install for i386
* installing *source* package 'ISAnalytics' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'ISAnalytics'
finding HTML links ... done
CIS_grubbs html
CIS_volcano_plot html
ISAnalytics html
aggregate_metadata html
aggregate_values_by_key html
annotation_IS_vars html
as_sparse_matrix html
association_file_columns html
clinical_relevant_suspicious_genes html
comparison_matrix html
compute_abundance html
compute_near_integrations html
cumulative_count_union html
date_columns_coll html
date_formats html
default_stats html
generate_Vispa2_launch_AF html
generate_blank_association_file html
import_association_file html
import_parallel_Vispa2Matrices_auto html
import_parallel_Vispa2Matrices_interactive
html
import_single_Vispa2Matrix html
known_clinical_oncogenes html
mandatory_IS_vars html
matching_options html
quantification_types html
realign_after_collisions html
reduced_AF_columns html
remove_collisions html
sample_statistics html
separate_quant_matrices html
threshold_filter html
top_integrations html
unzip_file_system html
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'ISAnalytics' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'ISAnalytics' as ISAnalytics_1.0.11.zip
* DONE (ISAnalytics)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'ISAnalytics' successfully unpacked and MD5 sums checked