| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:31:40 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the GraphAT package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 782/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| GraphAT 1.62.0 (landing page) Thomas LaFramboise
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: GraphAT |
| Version: 1.62.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GraphAT_1.62.0.tar.gz && rm -rf GraphAT.buildbin-libdir && mkdir GraphAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GraphAT.buildbin-libdir GraphAT_1.62.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GraphAT_1.62.0.zip && rm GraphAT_1.62.0.tar.gz GraphAT_1.62.0.zip |
| StartedAt: 2021-05-05 17:07:17 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:07:37 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 19.7 seconds |
| RetCode: 0 |
| Status: OK |
##############################################################################
##############################################################################
###
### Running command:
###
### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/GraphAT_1.62.0.tar.gz && rm -rf GraphAT.buildbin-libdir && mkdir GraphAT.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=GraphAT.buildbin-libdir GraphAT_1.62.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL GraphAT_1.62.0.zip && rm GraphAT_1.62.0.tar.gz GraphAT_1.62.0.zip
###
##############################################################################
##############################################################################
% Total % Received % Xferd Average Speed Time Time Time Current
Dload Upload Total Spent Left Speed
0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0
100 1928k 100 1928k 0 0 45.6M 0 --:--:-- --:--:-- --:--:-- 47.0M
install for i386
* installing *source* package 'GraphAT' ...
** using staged installation
** R
** data
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
converting help for package 'GraphAT'
finding HTML links ... done
Phenoclusters html
causton html
cellcycle html
clust2Mat html
depthmat html
getpvalue html
giaever html
mRNAclusters html
makeClustM html
mat2UndirG html
permPower html
perms html
** building package indices
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'GraphAT' ...
** testing if installed package can be loaded
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
* MD5 sums
packaged installation of 'GraphAT' as GraphAT_1.62.0.zip
* DONE (GraphAT)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'GraphAT' successfully unpacked and MD5 sums checked