Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:31:04 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the EventPointer package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 573/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
EventPointer 2.8.0 (landing page) Juan Pablo Romero
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: EventPointer |
Version: 2.8.0 |
Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/EventPointer_2.8.0.tar.gz && rm -rf EventPointer.buildbin-libdir && mkdir EventPointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EventPointer.buildbin-libdir EventPointer_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL EventPointer_2.8.0.zip && rm EventPointer_2.8.0.tar.gz EventPointer_2.8.0.zip |
StartedAt: 2021-05-05 18:13:22 -0400 (Wed, 05 May 2021) |
EndedAt: 2021-05-05 18:16:39 -0400 (Wed, 05 May 2021) |
EllapsedTime: 196.6 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/EventPointer_2.8.0.tar.gz && rm -rf EventPointer.buildbin-libdir && mkdir EventPointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EventPointer.buildbin-libdir EventPointer_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL EventPointer_2.8.0.zip && rm EventPointer_2.8.0.tar.gz EventPointer_2.8.0.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 764k 100 764k 0 0 24.6M 0 --:--:-- --:--:-- --:--:-- 25.7M install for i386 * installing *source* package 'EventPointer' ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Warning in .recacheSubclasses(def@className, def, env) : undefined subclass "numericVector" of class "Mnumeric"; definition not updated ** help *** installing help indices converting help for package 'EventPointer' finding HTML links ... done AllEvents_RNASeq html AllEvents_RNASeq_MP html ArrayDatamultipath html ArraysData html CDFfromGTF html CDFfromGTF_Multipath html EventDetection html EventDetectionMultipath html EventPointer html EventPointer_IGV html EventPointer_RNASeq html EventPointer_RNASeq_IGV html EventPointer_RNASeq_TranRef html EventXtrans html EventsGTFfromTrancriptomeGTF html FindPrimers html GetPSI_FromTranRef html InternalFunctions html MyPrimers html MyPrimers_taqman html PSI_Statistic html PSIss html PrepareBam_EP html SG_RNASeq html getbootstrapkallisto html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning in .recacheSubclasses(def@className, def, env) : undefined subclass "numericVector" of class "Mnumeric"; definition not updated ** testing if installed package can be loaded from final location Warning in .recacheSubclasses(def@className, def, env) : undefined subclass "numericVector" of class "Mnumeric"; definition not updated ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'EventPointer' ... ** testing if installed package can be loaded Warning in .recacheSubclasses(def@className, def, env) : undefined subclass "numericVector" of class "Mnumeric"; definition not updated * MD5 sums packaged installation of 'EventPointer' as EventPointer_2.8.0.zip * DONE (EventPointer) * installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library' package 'EventPointer' successfully unpacked and MD5 sums checked