| Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:31:04 -0400 (Thu, 06 May 2021).
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To the developers/maintainers of the EventPointer package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 573/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| EventPointer 2.8.0 (landing page) Juan Pablo Romero
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
| Package: EventPointer |
| Version: 2.8.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/EventPointer_2.8.0.tar.gz && rm -rf EventPointer.buildbin-libdir && mkdir EventPointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EventPointer.buildbin-libdir EventPointer_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL EventPointer_2.8.0.zip && rm EventPointer_2.8.0.tar.gz EventPointer_2.8.0.zip |
| StartedAt: 2021-05-05 18:13:22 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:16:39 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 196.6 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/EventPointer_2.8.0.tar.gz && rm -rf EventPointer.buildbin-libdir && mkdir EventPointer.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=EventPointer.buildbin-libdir EventPointer_2.8.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL EventPointer_2.8.0.zip && rm EventPointer_2.8.0.tar.gz EventPointer_2.8.0.zip
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100 764k 100 764k 0 0 24.6M 0 --:--:-- --:--:-- --:--:-- 25.7M
install for i386
* installing *source* package 'EventPointer' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** help
*** installing help indices
converting help for package 'EventPointer'
finding HTML links ... done
AllEvents_RNASeq html
AllEvents_RNASeq_MP html
ArrayDatamultipath html
ArraysData html
CDFfromGTF html
CDFfromGTF_Multipath html
EventDetection html
EventDetectionMultipath html
EventPointer html
EventPointer_IGV html
EventPointer_RNASeq html
EventPointer_RNASeq_IGV html
EventPointer_RNASeq_TranRef html
EventXtrans html
EventsGTFfromTrancriptomeGTF html
FindPrimers html
GetPSI_FromTranRef html
InternalFunctions html
MyPrimers html
MyPrimers_taqman html
PSI_Statistic html
PSIss html
PrepareBam_EP html
SG_RNASeq html
getbootstrapkallisto html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package can be loaded from final location
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'EventPointer' ...
** testing if installed package can be loaded
Warning in .recacheSubclasses(def@className, def, env) :
undefined subclass "numericVector" of class "Mnumeric"; definition not updated
* MD5 sums
packaged installation of 'EventPointer' as EventPointer_2.8.0.zip
* DONE (EventPointer)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'EventPointer' successfully unpacked and MD5 sums checked