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BUILD report for DESeq on tokay1

This page was generated on 2021-05-06 12:30:50 -0400 (Thu, 06 May 2021).

To the developers/maintainers of the DESeq package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 464/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
DESeq 1.42.0  (landing page)
Simon Anders
Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021)
URL: https://git.bioconductor.org/packages/DESeq
Branch: RELEASE_3_12
Last Commit: da76bc6
Last Changed Date: 2020-10-27 10:37:14 -0400 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    ERROR  skipped
tokay1Windows Server 2012 R2 Standard / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: DESeq
Version: 1.42.0
Command: chmod a+r DESeq -R && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data DESeq
StartedAt: 2021-05-05 20:33:52 -0400 (Wed, 05 May 2021)
EndedAt: 2021-05-05 20:34:14 -0400 (Wed, 05 May 2021)
EllapsedTime: 22.3 seconds
RetCode: 1
Status:   ERROR   
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   chmod a+r DESeq -R && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data DESeq
###
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* checking for file 'DESeq/DESCRIPTION' ... OK
* preparing 'DESeq':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'DESeq.Rnw' using Sweave

Error: processing vignette 'DESeq.Rnw' failed with diagnostics:
 chunk 8 (label = conditionCheck) 
Error : identical(condition, factor(c("untreated", "untreated", "treated",  .... is not TRUE

--- failed re-building 'DESeq.Rnw'

SUMMARY: processing the following file failed:
  'DESeq.Rnw'

Error: Vignette re-building failed.
Execution halted