Mikhail Spivakov
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/Chicago |
| Branch: RELEASE_3_12 |
| Last Commit: 36b6668 |
| Last Changed Date: 2020-10-27 11:09:38 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:12 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the Chicago package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 279/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| Chicago 1.18.0 (landing page) Mikhail Spivakov
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: Chicago |
| Version: 1.18.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/Chicago_1.18.0.tar.gz && rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Chicago.buildbin-libdir Chicago_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL Chicago_1.18.0.zip && rm Chicago_1.18.0.tar.gz Chicago_1.18.0.zip |
| StartedAt: 2021-05-05 17:34:33 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 17:36:46 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 133.0 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/Chicago_1.18.0.tar.gz && rm -rf Chicago.buildbin-libdir && mkdir Chicago.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=Chicago.buildbin-libdir Chicago_1.18.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL Chicago_1.18.0.zip && rm Chicago_1.18.0.tar.gz Chicago_1.18.0.zip
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install for i386
* installing *source* package 'Chicago' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Chicago'
finding HTML links ... done
Chicago-package html
cdUnitTest html
chicagoData html
chicagoPipeline html
copyCD html
defaultSettings html
estimateBrownianComponent html
estimateDistFun html
estimateTechnicalNoise html
exportResults html
getPvals html
getScores html
getSkOnly html
mergeSamples html
modifySettings html
normaliseBaits html
normaliseOtherEnds html
overlapFragWithFeatures html
finding level-2 HTML links ... done
peakEnrichment4Features html
plotBaits html
plotDistFun html
readAndMerge html
readSample html
setExperiment html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'Chicago' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'Chicago' as Chicago_1.18.0.zip
* DONE (Chicago)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'Chicago' successfully unpacked and MD5 sums checked