Back to Multiple platform build/check report for BioC 3.12 |
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This page was generated on 2021-05-06 12:30:10 -0400 (Thu, 06 May 2021).
To the developers/maintainers of the CeTF package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 263/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
CeTF 1.2.4 (landing page) Carlos Alberto Oliveira de Biagi Junior
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | |||||||||
tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | |||||||||
Package: CeTF |
Version: 1.2.4 |
Command: rm -rf CeTF.buildbin-libdir && mkdir CeTF.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CeTF.buildbin-libdir CeTF_1.2.4.tar.gz |
StartedAt: 2021-05-06 08:39:49 -0400 (Thu, 06 May 2021) |
EndedAt: 2021-05-06 08:42:05 -0400 (Thu, 06 May 2021) |
EllapsedTime: 136.1 seconds |
RetCode: 0 |
Status: OK |
PackageFile: CeTF_1.2.4.zip |
PackageFileSize: 3.628 MiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf CeTF.buildbin-libdir && mkdir CeTF.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=CeTF.buildbin-libdir CeTF_1.2.4.tar.gz ### ############################################################################## ############################################################################## install for i386 * installing *source* package 'CeTF' ... ** using staged installation ** libs "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PCIT.cpp -o PCIT.o "C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o C:/rtools40/mingw32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o CeTF.dll tmp.def PCIT.o RcppExports.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/i386 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/CeTF.buildbin-libdir/00LOCK-CeTF/00new/CeTF/libs/i386 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'CeTF' finding HTML links ... done CeTF-class html CeTFdemo html CircosTargets html InputData-methods html NetworkData-methods html OutputData-methods html PCIT html RIF html RIFPlot html RIF_input html SmearPlot html TFs html bivar.awk html clustCoef html clustCoefPercentage html densityPlot html diffusion html enrichPlot html enrichdemo html expDiff html getDE-methods html getData-methods html getEnrich html getGroupGO html heatPlot html histPlot html netConditionsPlot html netGOTFPlot html normExp html pcitC html refGenes html runAnalysis html simCounts html simNorm html tolerance html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'CeTF' ... ** libs "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c PCIT.cpp -o PCIT.o "C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.12-/R/include" -DNDEBUG -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.12-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o C:/rtools40/mingw64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o CeTF.dll tmp.def PCIT.o RcppExports.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.12-/R/bin/x64 -lR installing to C:/Users/biocbuild/bbs-3.12-bioc/meat/CeTF.buildbin-libdir/CeTF/libs/x64 ** testing if installed package can be loaded * MD5 sums packaged installation of 'CeTF' as CeTF_1.2.4.zip * DONE (CeTF)