John Lawson
| Snapshot Date: 2021-05-05 14:51:38 -0400 (Wed, 05 May 2021) |
| URL: https://git.bioconductor.org/packages/COCOA |
| Branch: RELEASE_3_12 |
| Last Commit: 9a75d3f |
| Last Changed Date: 2020-10-27 11:40:00 -0400 (Tue, 27 Oct 2020) |
| Back to Multiple platform build/check report for BioC 3.12 |
|
This page was generated on 2021-05-06 12:30:25 -0400 (Thu, 06 May 2021).
|
To the developers/maintainers of the COCOA package: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 346/1974 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| COCOA 2.4.0 (landing page) John Lawson
| malbec1 | Linux (Ubuntu 18.04.5 LTS) / x86_64 | OK | OK | OK | | ||||||||
| tokay1 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | OK | | ||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | OK | OK | OK | | ||||||||
| Package: COCOA |
| Version: 2.4.0 |
| Command: C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/COCOA_2.4.0.tar.gz && rm -rf COCOA.buildbin-libdir && mkdir COCOA.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=COCOA.buildbin-libdir COCOA_2.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL COCOA_2.4.0.zip && rm COCOA_2.4.0.tar.gz COCOA_2.4.0.zip |
| StartedAt: 2021-05-05 18:30:20 -0400 (Wed, 05 May 2021) |
| EndedAt: 2021-05-05 18:32:04 -0400 (Wed, 05 May 2021) |
| EllapsedTime: 104.5 seconds |
| RetCode: 0 |
| Status: OK |
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### Running command:
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### C:\cygwin\bin\curl.exe -O http://172.29.0.3/BBS/3.12/bioc/src/contrib/COCOA_2.4.0.tar.gz && rm -rf COCOA.buildbin-libdir && mkdir COCOA.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=COCOA.buildbin-libdir COCOA_2.4.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL COCOA_2.4.0.zip && rm COCOA_2.4.0.tar.gz COCOA_2.4.0.zip
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install for i386
* installing *source* package 'COCOA' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'COCOA'
finding HTML links ... done
COCOA html
aggregateSignal html
aggregateSignalGRList html
atf3_chr1 html
brcaATACCoord1 html
brcaATACData1 html
brcaMCoord1 html
brcaMetadata html
brcaMethylData1 html
brcaPCScores html
brcaPCScores657 html
convertToFromNullDist html
esr1_chr1 html
gata3_chr1 html
getGammaPVal html
getMetaRegionProfile html
getPermStat html
getTopRegions html
nrf1_chr1 html
plotAnnoScoreDist html
regionQuantileByTargetVar html
rsRankingIndex html
rsScoreHeatmap html
rsScores html
runCOCOA html
runCOCOAPerm html
signalAlongAxis html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'COCOA' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'COCOA' as COCOA_2.4.0.zip
* DONE (COCOA)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'COCOA' successfully unpacked and MD5 sums checked