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BUILD report for qvalue on tokay2

This page was generated on 2020-04-15 03:20:14 -0400 (Wed, 15 Apr 2020).

These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html)
TO THE DEVELOPERS/MAINTAINERS OF THE qvalue PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 64/89HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
qvalue 2.19.0
John D. Storey , Andrew J. Bass
Snapshot Date: 2020-04-14 17:00:05 -0400 (Tue, 14 Apr 2020)
URL: https://git.bioconductor.org/packages/qvalue
Branch: master
Last Commit: e8f8170
Last Changed Date: 2019-10-29 13:34:34 -0400 (Tue, 29 Oct 2019)
tokay2 Windows Server 2012 R2 Standard / x64  OK [ ERROR ] skipped  skipped 

Summary

Package: qvalue
Version: 2.19.0
Command: chmod a+r qvalue -R && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data qvalue
StartedAt: 2020-04-14 19:32:58 -0400 (Tue, 14 Apr 2020)
EndedAt: 2020-04-14 19:33:15 -0400 (Tue, 14 Apr 2020)
EllapsedTime: 17.5 seconds
RetCode: 1
Status:  ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   chmod a+r qvalue -R && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data qvalue
###
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* checking for file 'qvalue/DESCRIPTION' ... OK
* preparing 'qvalue':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'qvalue.Rnw' using knitr
Warning: 'mode(width)' differs between new and previous
	 ==> NOT changing 'width'
Warning: 'mode(width)' differs between new and previous
	 ==> NOT changing 'width'
Warning: 'mode(width)' differs between new and previous
	 ==> NOT changing 'width'
Warning: 'mode(width)' differs between new and previous
	 ==> NOT changing 'width'
Warning in system(paste(shQuote(texi2dvi), if (quiet) "--quiet" else "",  :
  running command '"C:\PROGRA~1\MIKTEX~1.9\miktex\bin\x64\texify.exe" --quiet --pdf "qvalue.tex" --max-iterations=20 -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/tex/latex" -I "C:/Users/bioctesting/bbs-3.11-bioc-testing/R/share/texmf/bibtex/bst"' had status 1
Error: processing vignette 'qvalue.Rnw' failed with diagnostics:
Failed to locate 'texi2pdf' output file 'qvalue.pdf' for vignette with name 'qvalue' and engine 'knitr::knitr'. The following files exist in working directory 'C:\Users\bioctesting\bbs-3.11-bioc-testing\tmpdir\RtmpOKik0L\Rbuildf50351a4b1c\qvalue\vignettes': 'qvalue.R' (2735 bytes), 'qvalue.Rnw' (21585 bytes), 'qvalue.tex' (28373 bytes), 'qvaluerefs.bib' (2686 bytes)
--- failed re-building 'qvalue.Rnw'

SUMMARY: processing the following file failed:
  'qvalue.Rnw'

Error: Vignette re-building failed.
Execution halted