Back to "Blame Jeroen" build/check report for BioC 3.11 |
This page was generated on 2020-04-15 03:20:10 -0400 (Wed, 15 Apr 2020).
These builds are using Rtools40 and R-testing by Jeroen Ooms (available at https://cran.r-project.org/bin/windows/testing/rtools40.html) |
TO THE DEVELOPERS/MAINTAINERS OF THE DelayedMatrixStats PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
Package 27/89 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | |||||
DelayedMatrixStats 1.9.1 Peter Hickey
| tokay2 | Windows Server 2012 R2 Standard / x64 | [ OK ] | ERROR | skipped | skipped |
Package: DelayedMatrixStats |
Version: 1.9.1 |
Command: C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/DelayedMatrixStats_1.9.1.tar.gz && rm -rf DelayedMatrixStats.buildbin-libdir && mkdir DelayedMatrixStats.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedMatrixStats.buildbin-libdir DelayedMatrixStats_1.9.1.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL DelayedMatrixStats_1.9.1.zip && rm DelayedMatrixStats_1.9.1.tar.gz DelayedMatrixStats_1.9.1.zip |
StartedAt: 2020-04-14 18:08:20 -0400 (Tue, 14 Apr 2020) |
EndedAt: 2020-04-14 18:08:51 -0400 (Tue, 14 Apr 2020) |
EllapsedTime: 31.2 seconds |
RetCode: 0 |
Status: OK |
############################################################################## ############################################################################## ### ### Running command: ### ### C:\cygwin\bin\curl.exe -O https://malbec2.bioconductor.org/BBS/3.11/bioc-testing/src/contrib/DelayedMatrixStats_1.9.1.tar.gz && rm -rf DelayedMatrixStats.buildbin-libdir && mkdir DelayedMatrixStats.buildbin-libdir && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=DelayedMatrixStats.buildbin-libdir DelayedMatrixStats_1.9.1.tar.gz && C:\Users\bioctesting\bbs-3.11-bioc-testing\R\bin\R.exe CMD INSTALL DelayedMatrixStats_1.9.1.zip && rm DelayedMatrixStats_1.9.1.tar.gz DelayedMatrixStats_1.9.1.zip ### ############################################################################## ############################################################################## % Total % Received % Xferd Average Speed Time Time Time Current Dload Upload Total Spent Left Speed 0 0 0 0 0 0 0 0 --:--:-- --:--:-- --:--:-- 0 100 53578 100 53578 0 0 723k 0 --:--:-- --:--:-- --:--:-- 792k install for i386 * installing *source* package 'DelayedMatrixStats' ... ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices converting help for package 'DelayedMatrixStats' finding HTML links ... done DelayedMatrixStats html colAlls html finding level-2 HTML links ... done colAnyNAs html colAvgsPerRowSet html colCollapse html Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCollapse.Rd:94: file link '[' in package 'base' does not exist and so has been treated as a topic colCounts html colCummaxs html Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCummaxs.Rd:180: file link 'cumprod' in package 'base' does not exist and so has been treated as a topic Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCummaxs.Rd:181: file link 'cummin' in package 'base' does not exist and so has been treated as a topic Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colCummaxs.Rd:181: file link 'cummax' in package 'base' does not exist and so has been treated as a topic colDiffs html colIQRDiffs html Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colIQRDiffs.Rd:228: file link 'var' in package 'stats' does not exist and so has been treated as a topic Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colIQRDiffs.Rd:283: file link 'var' in package 'stats' does not exist and so has been treated as a topic colIQRs html colLogSumExps html colMads html colMeans2 html colMedians html colOrderStats html colProds html Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colProds.Rd:92: file link 'product' in package 'matrixStats' does not exist and so has been treated as a topic Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colProds.Rd:107: file link 'is.nan' in package 'base' does not exist and so has been treated as a topic colQuantiles html colRanks html colSums2 html colTabulates html colVars html colWeightedMads html colWeightedMeans html colWeightedMedians html colWeightedVars html Rd warning: C:/Users/bioctesting/bbs-3.11-bioc-testing/tmpdir/Rtmpis1ZjE/R.INSTALLc306ac92fd5/DelayedMatrixStats/man/colWeightedVars.Rd:138: file link 'var' in package 'stats' does not exist and so has been treated as a topic from_DelayedArray_to_simple_seed_class html rowblock_APPLY html seedClass html subset_by_Nindex html ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path install for x64 * installing *source* package 'DelayedMatrixStats' ... ** testing if installed package can be loaded * MD5 sums packaged installation of 'DelayedMatrixStats' as DelayedMatrixStats_1.9.1.zip * DONE (DelayedMatrixStats) * installing to library 'C:/Users/bioctesting/bbs-3.11-bioc-testing/R/library' package 'DelayedMatrixStats' successfully unpacked and MD5 sums checked