| Back to Multiple platform build/check report for BioC 3.11 |
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This page was generated on 2020-10-17 11:57:52 -0400 (Sat, 17 Oct 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE sRAP PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1728/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
Charles Warden
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | ERROR | skipped | |||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | [ ERROR ] | skipped | skipped | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped |
| Package: sRAP |
| Version: 1.28.0 |
| Command: chmod a+r sRAP -R && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data sRAP |
| StartedAt: 2020-10-17 00:49:00 -0400 (Sat, 17 Oct 2020) |
| EndedAt: 2020-10-17 00:49:16 -0400 (Sat, 17 Oct 2020) |
| EllapsedTime: 16.2 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### chmod a+r sRAP -R && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data sRAP
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* checking for file 'sRAP/DESCRIPTION' ... OK
* preparing 'sRAP':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'sRAP.Rnw' using Sweave
Loading required package: WriteXLS
Warning: Package 'sRAP' is deprecated and will be removed from Bioconductor
version 3.12
ERROR: cannot open C:\Users\biocbuild\bbs-3.11-bioc\tmpdir\Rtmpiqas5Z/WriteXLS/1.csv
. No such file or directory
The Perl script 'WriteXLSX.pl' failed to run successfully.
Error: processing vignette 'sRAP.Rnw' failed with diagnostics:
chunk 3 (label = qc)
Error in if (expression.group == groups[j]) { :
argument is of length zero
--- failed re-building 'sRAP.Rnw'
SUMMARY: processing the following file failed:
'sRAP.Rnw'
Error: Vignette re-building failed.
Execution halted