Alba Gutierrez-Sacristan
| Snapshot Date: 2020-09-27 14:50:21 -0400 (Sun, 27 Sep 2020) |
| URL: https://git.bioconductor.org/packages/psygenet2r |
| Branch: RELEASE_3_11 |
| Last Commit: 5e2c70a |
| Last Changed Date: 2020-04-27 14:55:22 -0400 (Mon, 27 Apr 2020) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-09-28 12:25:04 -0400 (Mon, 28 Sep 2020).
| TO THE DEVELOPERS/MAINTAINERS OF THE psygenet2r PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 1375/1905 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| psygenet2r 1.20.0 Alba Gutierrez-Sacristan
| malbec2 | Linux (Ubuntu 18.04.4 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | ERROR | [ OK ] | |||||||
| machv2 | macOS 10.14.6 Mojave / x86_64 | OK | OK | WARNINGS | OK | |
| Package: psygenet2r |
| Version: 1.20.0 |
| Command: rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.20.0.tar.gz |
| StartedAt: 2020-09-28 11:04:14 -0400 (Mon, 28 Sep 2020) |
| EndedAt: 2020-09-28 11:04:46 -0400 (Mon, 28 Sep 2020) |
| EllapsedTime: 32.0 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: psygenet2r_1.20.0.zip |
| PackageFileSize: 1.796 MiB |
##############################################################################
##############################################################################
###
### Running command:
###
### rm -rf psygenet2r.buildbin-libdir && mkdir psygenet2r.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=psygenet2r.buildbin-libdir psygenet2r_1.20.0.tar.gz
###
##############################################################################
##############################################################################
install for i386
* installing *source* package 'psygenet2r' ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Note: possible error in 'psygenetGene(x, databse = "ALL")': unused argument (databse = "ALL")
Note: possible error in 'psygenetGene(x, databse = "ALL")': unused argument (databse = "ALL")
Note: possible error in 'psygenetGene(x, databse = "ALL")': unused argument (databse = "ALL")
Note: possible error in 'psygenetGene(x, databse = "ALL", ': unused argument (databse = "ALL")
** help
*** installing help indices
converting help for package 'psygenet2r'
finding HTML links ... done
DataGeNET.Psy-class html
JaccardIndexPsy-class html
enrichedPD-methods html
extract html
extractSentences html
geneAttrPlot-methods html
getUMLs-methods html
jaccardEstimation-methods html
ndisease html
ngene html
pantherGraphic-methods html
plot-DataGeNET.Psy-ANY-method html
plot-JaccardIndexPsy-ANY-method html
psygenet2r html
psygenetDisease-methods html
psygenetDiseaseSentences html
psygenetGene-methods html
psygenetGeneSentences html
qr html
topAnatEnrichment-methods html
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/RtmpCko7PD/R.INSTALLfd8191846a/psygenet2r/man/topAnatEnrichment-methods.Rd:21: file link 'runTest' in package 'topGO' does not exist and so has been treated as a topic
universe html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'psygenet2r' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'psygenet2r' as psygenet2r_1.20.0.zip
* DONE (psygenet2r)