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BUILD BIN report for prada on tokay2

This page was generated on 2020-10-17 11:57:26 -0400 (Sat, 17 Oct 2020).

TO THE DEVELOPERS/MAINTAINERS OF THE prada PACKAGE: Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1341/1905HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
prada 1.64.0
Florian Hahne
Snapshot Date: 2020-10-16 14:40:19 -0400 (Fri, 16 Oct 2020)
URL: https://git.bioconductor.org/packages/prada
Branch: RELEASE_3_11
Last Commit: a3977ac
Last Changed Date: 2020-04-27 14:09:49 -0400 (Mon, 27 Apr 2020)
malbec2 Linux (Ubuntu 18.04.4 LTS) / x86_64  OK  OK  ERROR 
tokay2 Windows Server 2012 R2 Standard / x64  OK  OK  ERROR [ OK ]
machv2 macOS 10.14.6 Mojave / x86_64  OK  OK  ERROR  OK 

Summary

Package: prada
Version: 1.64.0
Command: rm -rf prada.buildbin-libdir && mkdir prada.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=prada.buildbin-libdir prada_1.64.0.tar.gz
StartedAt: 2020-10-17 11:18:10 -0400 (Sat, 17 Oct 2020)
EndedAt: 2020-10-17 11:19:00 -0400 (Sat, 17 Oct 2020)
EllapsedTime: 50.3 seconds
RetCode: 0
Status:  OK  
PackageFile: prada_1.64.0.zip
PackageFileSize: 1.506 MiB

Command output

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###
### Running command:
###
###   rm -rf prada.buildbin-libdir && mkdir prada.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=prada.buildbin-libdir prada_1.64.0.tar.gz
###
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install for i386

* installing *source* package 'prada' ...
** using staged installation
** libs
"C:/rtools40/mingw32/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c inPolygon.c -o inPolygon.o
C:/rtools40/mingw32/bin/gcc -shared -s -static-libgcc -o prada.dll tmp.def inPolygon.o -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/prada.buildbin-libdir/00LOCK-prada/00new/prada/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'prada'
    finding HTML links ... done
    analysePlate                            html  
    as.all                                  html  
    barploterrbar                           html  
    combineFrames                           html  
    csApply                                 html  
    cytoFrame-class                         html  
    cytoSet-class                           html  
    finding level-2 HTML links ... done

Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmpe0Fi3q/R.INSTALL2288db02b53/prada/man/cytoSet-class.Rd:88: file link 'phenoData-class' in package 'Biobase' does not exist and so has been treated as a topic
    data-cytoFrame                          html  
    data-cytoSet                            html  
    devDims                                 html  
    devRes                                  html  
    fitNorm2                                html  
    gate-class                              html  
    gateSet-class                           html  
    getAlphaNumeric                         html  
    getPradaPar                             html  
    new-internal                            html  
    plotNorm2                               html  
    plotPlate                               html  
    readCytoSet                             html  
Rd warning: C:/Users/biocbuild/bbs-3.11-bioc/tmpdir/Rtmpe0Fi3q/R.INSTALL2288db02b53/prada/man/readCytoSet.Rd:11: file link 'dir' in package 'base' does not exist and so has been treated as a topic
    readFCS                                 html  
    readFCSaux                              html  
    removeCensored                          html  
    tcltkProgress                           html  
    threePanelPlot                          html  
    thresholds                              html  
    touchFCS                                html  
    vpLocation                              html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'prada' ...
** libs
"C:/rtools40/mingw64/bin/"gcc  -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG     -I"C:/extsoft/include"     -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c inPolygon.c -o inPolygon.o
C:/rtools40/mingw64/bin/gcc -shared -s -static-libgcc -o prada.dll tmp.def inPolygon.o -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/prada.buildbin-libdir/prada/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'prada' as prada_1.64.0.zip
* DONE (prada)