Simon Dirmeier
| Snapshot Date: 2020-02-08 16:45:07 -0500 (Sat, 08 Feb 2020) |
| URL: https://git.bioconductor.org/packages/netReg |
| Branch: master |
| Last Commit: a30652f |
| Last Changed Date: 2019-10-29 13:42:17 -0500 (Tue, 29 Oct 2019) |
| Back to Multiple platform build/check report for BioC 3.11 |
|
This page was generated on 2020-02-09 12:43:42 -0500 (Sun, 09 Feb 2020).
| Package 1147/1824 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||
| netReg 1.11.0 Simon Dirmeier
| malbec2 | Linux (Ubuntu 18.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||
| tokay2 | Windows Server 2012 R2 Standard / x64 | OK | OK | OK | [ OK ] | |
| Package: netReg |
| Version: 1.11.0 |
| Command: rm -rf netReg.buildbin-libdir && mkdir netReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netReg.buildbin-libdir netReg_1.11.0.tar.gz |
| StartedAt: 2020-02-09 12:04:56 -0500 (Sun, 09 Feb 2020) |
| EndedAt: 2020-02-09 12:07:42 -0500 (Sun, 09 Feb 2020) |
| EllapsedTime: 165.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: netReg_1.11.0.zip |
| PackageFileSize: 3.954 MiB |
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### Running command:
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### rm -rf netReg.buildbin-libdir && mkdir netReg.buildbin-libdir && C:\Users\biocbuild\bbs-3.11-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=netReg.buildbin-libdir netReg_1.11.0.tar.gz
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install for i386
* installing *source* package 'netReg' ...
** using staged installation
** libs
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c cv_set.cpp -o cv_set.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c data_factory.cpp -o data_factory.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c edgenet.cpp -o edgenet.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c edgenet_model_selection.cpp -o edgenet_model_selection.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c edgenet_wrapper.cpp -o edgenet_wrapper.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c graph_functions.cpp -o graph_functions.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c graph_model_cv_data.cpp -o graph_model_cv_data.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c netReg_wrapper.cpp -o netReg_wrapper.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c stat_functions.cpp -o stat_functions.o
C:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c vector_functions.cpp -o vector_functions.o
C:/Rtools/mingw_32/bin/g++ -shared -s -static-libgcc -o netReg.dll tmp.def cv_set.o data_factory.o edgenet.o edgenet_model_selection.o edgenet_wrapper.o graph_functions.o graph_model_cv_data.o netReg_wrapper.o stat_functions.o vector_functions.o -fopenmp -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/i386 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/i386 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/netReg.buildbin-libdir/00LOCK-netReg/00new/netReg/libs/i386
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'netReg'
finding HTML links ... done
cv.edgenet html
edgenet html
netReg-package html
predict.gaussian.edgenet html
yeast html
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
install for x64
* installing *source* package 'netReg' ...
** libs
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c cv_set.cpp -o cv_set.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c data_factory.cpp -o data_factory.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c edgenet.cpp -o edgenet.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c edgenet_model_selection.cpp -o edgenet_model_selection.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c edgenet_wrapper.cpp -o edgenet_wrapper.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c graph_functions.cpp -o graph_functions.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c graph_model_cv_data.cpp -o graph_model_cv_data.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c netReg_wrapper.cpp -o netReg_wrapper.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c stat_functions.cpp -o stat_functions.o
C:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"C:/Users/BIOCBU~1/BBS-3~1.11-/R/include" -DNDEBUG -DUSE_RCPPARMADILLO -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/Rcpp/include' -I'C:/Users/biocbuild/bbs-3.11-bioc/R/library/RcppArmadillo/include' -I"C:/extsoft/include" -I. -fopenmp -O2 -Wall -mtune=generic -c vector_functions.cpp -o vector_functions.o
C:/Rtools/mingw_64/bin/g++ -shared -s -static-libgcc -o netReg.dll tmp.def cv_set.o data_factory.o edgenet.o edgenet_model_selection.o edgenet_wrapper.o graph_functions.o graph_model_cv_data.o netReg_wrapper.o stat_functions.o vector_functions.o -fopenmp -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lRlapack -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -LC:/extsoft/lib/x64 -LC:/extsoft/lib -LC:/Users/BIOCBU~1/BBS-3~1.11-/R/bin/x64 -lR
installing to C:/Users/biocbuild/bbs-3.11-bioc/meat/netReg.buildbin-libdir/netReg/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'netReg' as netReg_1.11.0.zip
* DONE (netReg)